Hello, I am wondering if I can use "seqret" from EMBOSS to perform following action.
I have a database and I have a file which consists of list of protein IDs. I want use seqret to search each entry (in the given file) in the given database and output the search into another file. for example: seqret "path to the database":AAT37944.1. If I use the above mentioned command on command line, I get the output (protein name, protein sequence etc) in fasta format consisting the entry. What I want to do is instead of giving one entry I want to give the whole file, which consists of similar entries. Can some one help me here. Thanks Sudeep _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
