Hi Tim Thanks for your email. I am not a big java guru. Can you point to me how to get a compatible sun java with emboss 6.0.1?
Eric On Tue, Apr 7, 2009 at 12:32 AM, Tim Carver <[email protected]> wrote: > Hi Eric > > This looks to me as if it is trying to run with Gnu Java. You probably need > to set your PATH to point at Sun Java and also make sure it was compiled > with that. > > Regards > Tim > > > On 4/7/09 1:17 AM, "Eric Userlist" <[email protected]> wrote: > > > Hi > > I have installed emboss in an intel redhat machine (Linux 2.6.9-34.ELsmp > #1 > > SMP Fri Feb 24 16:54:53 EST 2006 i686 i686 i386 GNU/Linux) and tested > > several commands that seem to work. However I get the following errors > after > > "successful" installing jemboss: > > > > Exception in thread "main" java.lang.NoClassDefFoundError: > > org.emboss.jemboss.Jemboss > > at gnu.gcj.runtime.FirstThread.run() (/usr/lib/libgcj.so.5.0.0) > > at _Jv_ThreadRun(java.lang.Thread) (/usr/lib/libgcj.so.5.0.0) > > at _Jv_RunMain(java.lang.Class, byte const, int, byte const, boolean) > > (/usr/lib/libgcj.so.5.0.0) > > > > I tried to search the emboss website and related discussions in the > > internet. Some people seem to run into similar problems but no solutions > > were offered. I hope to get some help here. Thank you very much! > > > > Eric > > _______________________________________________ > > EMBOSS mailing list > > [email protected] > > http://lists.open-bio.org/mailman/listinfo/emboss > > > > > -- > The Wellcome Trust Sanger Institute is operated by Genome Research > Limited, a charity registered in England with number 1021457 and a > company registered in England with number 2742969, whose registered > office is 215 Euston Road, London, NW1 2BE. > _______________________________________________ EMBOSS mailing list [email protected] http://lists.open-bio.org/mailman/listinfo/emboss
