On the parport there is an 'in-not' pin for every 'in' pin.
http://www.linuxcnc.org/docview/html//hal_drivers.html#r1_1_2
it sounds like you should use in-not in your case:
net home+limitX parport.0.pin-11-in-not => axis.0.neg-lim-sw-in
Jeff
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