I guess John replied about it in his previous threads and released a patch too.
On Wed, Dec 12, 2012 at 11:05 AM, Eric Lyons <[email protected]> wrote: > Hi, > > I'm wondering if anyone has seen this problem where running ibis (no > options) yields very different run times (no load on the system): > > elyons@XXX (~/src/fastbit-ibis1.3.4/bin) $ time ./ibis > > FastBit ibis1.3.4 > > List of options for ./ibis > ... > NOTE: the output file stores the results selected by queries, the log file > is for the rest of the messages such error messages and debug information > > > real 0m0.289s > user 0m0.000s > sys 0m0.000s > > elyons@XXX (~/src/fastbit-ibis1.3.4/bin) $ time ./ibis > > FastBit ibis1.3.4 > > List of options for ./ibis > ... > NOTE: the output file stores the results selected by queries, the log file > is for the rest of the messages such error messages and debug information > > > real 0m7.556s > user 0m0.000s > sys 0m0.000s > > > I've tried this one two different systems (both running Ubuntu) and will > two versions of ibis (1.3.3 and 1.3.4). The wait time can be up to 15 > seconds. Any ideas? > > Thanks, > -eric > > --------------------------------------------------- > Eric Lyons, Ph.D. > Comparative Genomics > http://genomevolution.org > > Assistant Professor > School of Plant Sciences > iPlant Collaborative Member > Bio5 Institute, University of Arizona, Tucson > > Phone: 520-626-5070 > Email: [email protected] > SkypeID: ericlyons > > > _______________________________________________ > FastBit-users mailing list > [email protected] > https://hpcrdm.lbl.gov/cgi-bin/mailman/listinfo/fastbit-users > >
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