Please either use version 1.3.2 <https://codeforge.lbl.gov/frs/download.php/395/fastbit-ibis1.3.2.tar.gz> or use the latest source code from the SVN. You can access the source code with
svn checkout https://codeforge.lbl.gov/anonscm/fastbit There are some changes to the code involving other aspects which require some additional testing right now. As soon as that is done, we will release a tar ball. Thanks. John On 12/12/12 11:07 AM, preeti gupta wrote: > I guess John replied about it in his previous threads and released a > patch too. > > On Wed, Dec 12, 2012 at 11:05 AM, Eric Lyons <[email protected] > <mailto:[email protected]>> wrote: > > Hi, > > I'm wondering if anyone has seen this problem where running ibis > (no options) yields very different run times (no load on the system): > > elyons@XXX (~/src/fastbit-ibis1.3.4/bin) $ time ./ibis > > FastBit ibis1.3.4 > > List of options for ./ibis > ... > NOTE: the output file stores the results selected by queries, > the log file is for the rest of the messages such error > messages and debug information > > > real0m0.289s > user0m0.000s > sys0m0.000s > > elyons@XXX (~/src/fastbit-ibis1.3.4/bin) $ time ./ibis > > FastBit ibis1.3.4 > > List of options for ./ibis > ... > NOTE: the output file stores the results selected by queries, > the log file is for the rest of the messages such error > messages and debug information > > > real0m7.556s > user0m0.000s > sys0m0.000s > > > I've tried this one two different systems (both running Ubuntu) > and will two versions of ibis (1.3.3 and 1.3.4). The wait time > can be up to 15 seconds. Any ideas? > > Thanks, > -eric > > --------------------------------------------------- > Eric Lyons, Ph.D. > Comparative Genomics > http://genomevolution.org > > Assistant Professor > School of Plant Sciences > iPlant Collaborative Member > Bio5 Institute, University of Arizona, Tucson > > Phone: 520-626-5070 <tel:520-626-5070> > Email: [email protected] <mailto:[email protected]> > SkypeID: ericlyons > > > _______________________________________________ > FastBit-users mailing list > [email protected] <mailto:[email protected]> > https://hpcrdm.lbl.gov/cgi-bin/mailman/listinfo/fastbit-users > > > > > _______________________________________________ > FastBit-users mailing list > [email protected] > https://hpcrdm.lbl.gov/cgi-bin/mailman/listinfo/fastbit-users > _______________________________________________ FastBit-users mailing list [email protected] https://hpcrdm.lbl.gov/cgi-bin/mailman/listinfo/fastbit-users
