Hello, I am attempting to index a file consisting of unsigned integer data using the example program "buildIndex" included with fastquery. This program works fine for the test data included with the source code.
However, when I try to index my data, I receive the following memory allocation error: Warning -- fileManager::storage::ctor unable to find 6,572,816,304 bytes of space in memory terminate called after throwing an instance of 'ibis::bad_alloc' what(): storage::ctor(memory) failed This error is revealed very early in the execution of the program. By monitoring the memory being used, I can tell that only 58756 Kb have been allocated by the program. The server where this is running has no shortage of RAM available. I am willing to share the dataset that I am using but it is 3.2 Gb, so it cannot be transferred as part of this message. Any help that can you can provide to figure out this issue is appreciated. Thanks, -- Darryl Reeves Ph.D. Candidate Mason Lab Weill Cornell Medical College of Cornell University Tri-Institutional Program in Computational Biology and Medicine
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