Hi, Darryl, Are you able to share the test data with us? It would be useful for us to reproduce the problem.
If yes, please provide instructions on reproducing the problem. Thanks. K Wu On Jul 24, 2014 1:25 AM, "Darryl Reeves" <[email protected]> wrote: > Hello, > > I am attempting to index a file consisting of unsigned integer data using > the example program "buildIndex" included with fastquery. This program > works fine for the test data included with the source code. > > However, when I try to index my data, I receive the following memory > allocation error: > > Warning -- fileManager::storage::ctor unable to find 6,572,816,304 bytes > of space in memory > terminate called after throwing an instance of 'ibis::bad_alloc' > what(): storage::ctor(memory) failed > > This error is revealed very early in the execution of the program. By > monitoring the memory being used, I can tell that only 58756 Kb have been > allocated by the program. The server where this is running has no shortage > of RAM available. I am willing to share the dataset that I am using but it > is 3.2 Gb, so it cannot be transferred as part of this message. > > Any help that can you can provide to figure out this issue is appreciated. > > Thanks, > > -- > Darryl Reeves > Ph.D. Candidate > Mason Lab > Weill Cornell Medical College of Cornell University > Tri-Institutional Program in Computational Biology and Medicine > > _______________________________________________ > FastBit-users mailing list > [email protected] > https://hpcrdm.lbl.gov/cgi-bin/mailman/listinfo/fastbit-users > >
_______________________________________________ FastBit-users mailing list [email protected] https://hpcrdm.lbl.gov/cgi-bin/mailman/listinfo/fastbit-users
