On Mon, 2 Feb 2015 15:09:30 -0600
"Laboure, Vincent M" <[email protected]> wrote:
> 2015/02/02 12:05:47 - INFO: [package:run_job] running [u'/bin/bash',
> '_hashdist/build.sh']
> 2015/02/02 12:05:47 - INFO: [package:run_job] environment:
> 2015/02/02 12:05:47 - INFO: [package:run_job] {'ARTIFACT':
> u'/home/user1/.hashdist/bld/dolfin/sd2jntuwgyab',
> 2015/02/02 12:05:47 - INFO: [package:run_job] 'BASH': u'/bin/bash',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'BLAS_DIR':
> u'/home/user1/.hashdist/bld/blas/xsvwemqbi4dt',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'BLAS_ID':
> u'blas/xsvwemqbi4dtutp326zzjpoldt62lqpa',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'BOOST_DIR':
> u'/home/user1/.hashdist/bld/boost/zmax7yphkmao',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'BOOST_ID':
> u'boost/zmax7yphkmao7evnbjufr42nd4a3frmj',
> 2015/02/02 12:05:47 - INFO: [package:run_job]
> 'BOOST_MULTITHREADED': u'OFF',
> 2015/02/02 12:05:47 - INFO: [package:run_job] 'BUILD':
> u'/home/user1/.hashdist/tmp/dolfin-sd2jntuwgyab',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'BZIP2_DIR':
> u'/home/user1/.hashdist/bld/bzip2/yhn7t7sdxdfd',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'BZIP2_ID':
> u'bzip2/yhn7t7sdxdfdkhyie6hg36hqvgccj7rj',
> 2015/02/02 12:05:47 - INFO: [package:run_job] 'CMAKE':
> u'/home/user1/.hashdist/bld/cmake/ugrko5ribtzl/bin/cmake',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'CMAKE_DIR':
> u'/home/user1/.hashdist/bld/cmake/ugrko5ribtzl',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'CMAKE_ID':
> u'cmake/ugrko5ribtzlnijeygdngjxzk774ea6w',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'EIGEN_DIR':
> u'/home/user1/.hashdist/bld/eigen/hnx37jhbthr7',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'EIGEN_ID':
> u'eigen/hnx37jhbthr76kcfxbecmb37lvsw3tio',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'FFC_DIR':
> u'/home/user1/.hashdist/bld/ffc/wndwpzdx6z4i',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'FFC_ID':
> u'ffc/wndwpzdx6z4iu7q5e54kmdxcnsmn42rq',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'FIAT_DIR':
> u'/home/user1/.hashdist/bld/fiat/kxmwufjwtvoz',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'FIAT_ID':
> u'fiat/kxmwufjwtvozfkre37a2w36ek5gzjywv',
> 2015/02/02 12:05:47 - INFO: [package:run_job]
> 'HASHDIST_CPU_COUNT': '4', 2015/02/02 12:05:47 - INFO:
> [package:run_job] u'HDF5_DIR':
> u'/home/user1/.hashdist/bld/hdf5/526csz6keqgw', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'HDF5_ID':
> u'hdf5/526csz6keqgwfu5xmjeqheawdt2ghdms', 2015/02/02 12:05:47 - INFO:
> [package:run_job] 'HDF5_ROOT':
> u'/home/user1/.hashdist/bld/hdf5/526csz6keqgw', 2015/02/02 12:05:47 -
> INFO: [package:run_job] 'HDIST_CONFIG':
> '{"gc_roots":"/home/user1/.hashdist/gcroots","build_stores":[{"dir":"/home/user1/.hashdist/bld"}],"source_caches":[{"dir":"/home/user1/.hashdist/src"}],"cache":"/home/user1/.hashdist/cache","build_temp":"/home/user1/.hashdist/tmp"}',
> 2015/02/02 12:05:47 - INFO: [package:run_job] 'HDIST_IMPORT':
> u'blas/xsvwemqbi4dtutp326zzjpoldt62lqpa
> boost/zmax7yphkmao7evnbjufr42nd4a3frmj
> bzip2/yhn7t7sdxdfdkhyie6hg36hqvgccj7rj
> cmake/ugrko5ribtzlnijeygdngjxzk774ea6w
> eigen/hnx37jhbthr76kcfxbecmb37lvsw3tio
> ffc/wndwpzdx6z4iu7q5e54kmdxcnsmn42rq
> fiat/kxmwufjwtvozfkre37a2w36ek5gzjywv
> hdf5/526csz6keqgwfu5xmjeqheawdt2ghdms
> instant/lwqm4t5o2d2jbuk7ph5sltg6igm2bvdy
> libxml2/rnluwaluut6hbddgbuhmnvlhgewcmiv4
> mpi/uypp5r7iktyt2cdswp3j2hlatpowq5iv
> numpy/3hrohecbsctu3yvy7vvy6oz5pxyx2gpy
> parmetis/r4irzb2fugktajlvpghq7xocldlwdrk4
> patchelf/k3rloj265ogtl4dmmmbmyt34dnffryka
> petsc/7nxuz3xuqtubrhgthfz52nplxl35knfz
> petsc4py/6ax3arzqi4pm72nsuct35fiakr4yiq5b
> pkg-config/pjksilnbb4iyvrsemnzshe2d3o7uwpa5
> ply/6pvgzq3qp6zqb4f2o7vph5eezbo3zkrw
> python/ctzx2dm36c6dhl5oyrpmtcdv7vxuoy65
> scotch/2xawkbuuknogjiod5otswxc4u53hoxyw
> six/jads6verbqes45sfkfd33uwdyk5o6w7l
> slepc/doi4vlbw73drw7fxjnbxrouczhjwcaf4
> slepc4py/6og5r3socrbnr7dczjq54uhsukuchls4
> suitesparse/hudaaariibpah7cr6emr3cstjnp3nuln
> swig/3lpocpbczonvlk57trvndbrlfugaihyu
> sympy/zjk5rig5qkqsvoykcweg6zk3wasngux4
> ufl/mw2vvqux3a2hbvdsbgpte7ijzoucmhnz
> vtk/6jaf25efaug6wymiwxldnzebi5l4gprt
> zlib/3el5ccejre7bcjqgld5gp6iym4ccd5oe', 2015/02/02 12:05:47 - INFO:
> [package:run_job] 'HDIST_IMPORT_PATHS':
> u'/home/user1/.hashdist/bld/blas/xsvwemqbi4dt:/home/user1/.hashdist/bld/boost/zmax7yphkmao:/home/user1/.hashdist/bld/bzip2/yhn7t7sdxdfd:/home/user1/.hashdist/bld/cmake/ugrko5ribtzl:/home/user1/.hashdist/bld/eigen/hnx37jhbthr7:/home/user1/.hashdist/bld/ffc/wndwpzdx6z4i:/home/user1/.hashdist/bld/fiat/kxmwufjwtvoz:/home/user1/.hashdist/bld/hdf5/526csz6keqgw:/home/user1/.hashdist/bld/instant/lwqm4t5o2d2j:/home/user1/.hashdist/bld/libxml2/rnluwaluut6h:/home/user1/.hashdist/bld/mpi/uypp5r7iktyt:/home/user1/.hashdist/bld/numpy/3hrohecbsctu:/home/user1/.hashdist/bld/parmetis/r4irzb2fugkt:/home/user1/.hashdist/bld/patchelf/k3rloj265ogt:/home/user1/.hashdist/bld/petsc/7nxuz3xuqtub:/home/user1/.hashdist/bld/petsc4py/6ax3arzqi4pm:/home/user1/.hashdist/bld/pkg-config/pjksilnbb4iy:/home/user1/.hashdist/bld/ply/6pvgzq3qp6zq:/home/user1/.hashdist/bld/python/ctzx2dm36c6d:/home/user1/.hashdist/bld/scotch/2xawkbuuknog:/home/user1/.hashdist/bld/six/jads6verbqes:/home/user1/.hashdist/bld/slepc/doi4vlbw73dr:/home/user1/.hashdist/bld/slepc4py/6og5r3socrbn:/home/user1/.hashdist/bld/suitesparse/hudaaariibpa:/home/user1/.hashdist/bld/swig/3lpocpbczonv:/home/user1/.hashdist/bld/sympy/zjk5rig5qkqs:/home/user1/.hashdist/bld/ufl/mw2vvqux3a2h:/home/user1/.hashdist/bld/vtk/6jaf25efaug6:/home/user1/.hashdist/bld/zlib/3el5ccejre7b',
> 2015/02/02 12:05:47 - INFO: [package:run_job] 'HDIST_VIRTUALS':
> '', 2015/02/02 12:05:47 - INFO: [package:run_job] u'INSTANT_DIR':
> u'/home/user1/.hashdist/bld/instant/lwqm4t5o2d2j', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'INSTANT_ID':
> u'instant/lwqm4t5o2d2jbuk7ph5sltg6igm2bvdy', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'LIBXML2_DIR':
> u'/home/user1/.hashdist/bld/libxml2/rnluwaluut6h', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'LIBXML2_ID':
> u'libxml2/rnluwaluut6hbddgbuhmnvlhgewcmiv4', 2015/02/02 12:05:47 -
> INFO: [package:run_job] 'MPICC':
> u'/home/user1/.hashdist/bld/mpi/uypp5r7iktyt/bin/mpicc', 2015/02/02
> 12:05:47 - INFO: [package:run_job] 'MPICXX':
> u'/home/user1/.hashdist/bld/mpi/uypp5r7iktyt/bin/mpic++', 2015/02/02
> 12:05:47 - INFO: [package:run_job] 'MPIEXEC':
> u'/home/user1/.hashdist/bld/mpi/uypp5r7iktyt/bin/mpiexec', 2015/02/02
> 12:05:47 - INFO: [package:run_job] 'MPIF77':
> u'/home/user1/.hashdist/bld/mpi/uypp5r7iktyt/bin/mpif77', 2015/02/02
> 12:05:47 - INFO: [package:run_job] 'MPIF90':
> u'/home/user1/.hashdist/bld/mpi/uypp5r7iktyt/bin/mpif90', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'MPI_DIR':
> u'/home/user1/.hashdist/bld/mpi/uypp5r7iktyt', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'MPI_ID':
> u'mpi/uypp5r7iktyt2cdswp3j2hlatpowq5iv', 2015/02/02 12:05:47 - INFO:
> [package:run_job] u'NUMPY_DIR':
> u'/home/user1/.hashdist/bld/numpy/3hrohecbsctu', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'NUMPY_ID':
> u'numpy/3hrohecbsctu3yvy7vvy6oz5pxyx2gpy', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'PARMETIS_DIR':
> u'/home/user1/.hashdist/bld/parmetis/r4irzb2fugkt', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'PARMETIS_ID':
> u'parmetis/r4irzb2fugktajlvpghq7xocldlwdrk4', 2015/02/02 12:05:47 -
> INFO: [package:run_job] 'PATCHELF':
> u'/home/user1/.hashdist/bld/patchelf/k3rloj265ogt/bin/patchelf',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'PATCHELF_DIR':
> u'/home/user1/.hashdist/bld/patchelf/k3rloj265ogt', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'PATCHELF_ID':
> u'patchelf/k3rloj265ogtl4dmmmbmyt34dnffryka', 2015/02/02 12:05:47 -
> INFO: [package:run_job] 'PATH':
> u'/home/user1/.hashdist/bld/swig/3lpocpbczonv/bin:/home/user1/.hashdist/bld/python/ctzx2dm36c6d/bin:/home/user1/.hashdist/bld/pkg-config/pjksilnbb4iy/bin:/home/user1/.hashdist/bld/mpi/uypp5r7iktyt/bin:/home/user1/.hashdist/bld/libxml2/rnluwaluut6h/bin:/home/user1/.hashdist/bld/hdf5/526csz6keqgw/bin:/home/user1/.hashdist/bld/ffc/wndwpzdx6z4i/bin:/home/user1/.hashdist/bld/cmake/ugrko5ribtzl/bin:/usr/bin:/bin',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'PETSC4PY_DIR':
> u'/home/user1/.hashdist/bld/petsc4py/6ax3arzqi4pm', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'PETSC4PY_ID':
> u'petsc4py/6ax3arzqi4pm72nsuct35fiakr4yiq5b', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'PETSC_DIR':
> u'/home/user1/.hashdist/bld/petsc/7nxuz3xuqtub', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'PETSC_ID':
> u'petsc/7nxuz3xuqtubrhgthfz52nplxl35knfz', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'PKG_CONFIG_DIR':
> u'/home/user1/.hashdist/bld/pkg-config/pjksilnbb4iy', 2015/02/02
> 12:05:47 - INFO: [package:run_job] 'PKG_CONFIG_EXECUTABLE':
> u'/home/user1/.hashdist/bld/pkg-config/pjksilnbb4iy/bin/pkg-config',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'PKG_CONFIG_ID':
> u'pkg-config/pjksilnbb4iyvrsemnzshe2d3o7uwpa5', 2015/02/02 12:05:47 -
> INFO: [package:run_job] 'PKG_CONFIG_PATH':
> u'/home/user1/.hashdist/bld/python/ctzx2dm36c6d/lib/pkgconfig:/home/user1/.hashdist/bld/libxml2/rnluwaluut6h/lib/pkgconfig',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'PLY_DIR':
> u'/home/user1/.hashdist/bld/ply/6pvgzq3qp6zq', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'PLY_ID':
> u'ply/6pvgzq3qp6zqb4f2o7vph5eezbo3zkrw', 2015/02/02 12:05:47 - INFO:
> [package:run_job] 'PWD':
> u'/home/user1/.hashdist/tmp/dolfin-sd2jntuwgyab', 2015/02/02 12:05:47
> - INFO: [package:run_job] 'PYTHON':
> u'/home/user1/.hashdist/bld/python/ctzx2dm36c6d/bin/python',
> 2015/02/02 12:05:47 - INFO: [package:run_job] 'PYTHONPATH':
> u'/home/user1/.hashdist/bld/vtk/6jaf25efaug6/lib/python2.7/site-packages:/home/user1/.hashdist/bld/ufl/mw2vvqux3a2h/lib/python2.7/site-packages:/home/user1/.hashdist/bld/sympy/zjk5rig5qkqs/lib/python2.7/site-packages:/home/user1/.hashdist/bld/slepc4py/6og5r3socrbn/lib/python2.7/site-packages:/home/user1/.hashdist/bld/six/jads6verbqes/lib/python2.7/site-packages:/home/user1/.hashdist/bld/ply/6pvgzq3qp6zq/lib/python2.7/site-packages:/home/user1/.hashdist/bld/petsc4py/6ax3arzqi4pm/lib/python2.7/site-packages:/home/user1/.hashdist/bld/numpy/3hrohecbsctu/lib/python2.7/site-packages:/home/user1/.hashdist/bld/instant/lwqm4t5o2d2j/lib/python2.7/site-packages:/home/user1/.hashdist/bld/fiat/kxmwufjwtvoz/lib/python2.7/site-packages:/home/user1/.hashdist/bld/ffc/wndwpzdx6z4i/lib/python2.7/site-packages',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'PYTHON_DIR':
> u'/home/user1/.hashdist/bld/python/ctzx2dm36c6d', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'PYTHON_ID':
> u'python/ctzx2dm36c6dhl5oyrpmtcdv7vxuoy65', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'SCOTCH_DIR':
> u'/home/user1/.hashdist/bld/scotch/2xawkbuuknog', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'SCOTCH_ID':
> u'scotch/2xawkbuuknogjiod5otswxc4u53hoxyw', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'SIX_DIR':
> u'/home/user1/.hashdist/bld/six/jads6verbqes', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'SIX_ID':
> u'six/jads6verbqes45sfkfd33uwdyk5o6w7l', 2015/02/02 12:05:47 - INFO:
> [package:run_job] u'SLEPC4PY_DIR':
> u'/home/user1/.hashdist/bld/slepc4py/6og5r3socrbn', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'SLEPC4PY_ID':
> u'slepc4py/6og5r3socrbnr7dczjq54uhsukuchls4', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'SLEPC_DIR':
> u'/home/user1/.hashdist/bld/slepc/doi4vlbw73dr', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'SLEPC_ID':
> u'slepc/doi4vlbw73drw7fxjnbxrouczhjwcaf4', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'SUITESPARSE_DIR':
> u'/home/user1/.hashdist/bld/suitesparse/hudaaariibpa', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'SUITESPARSE_ID':
> u'suitesparse/hudaaariibpah7cr6emr3cstjnp3nuln', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'SWIG_DIR':
> u'/home/user1/.hashdist/bld/swig/3lpocpbczonv', 2015/02/02 12:05:47 -
> INFO: [package:run_job] 'SWIG_EXECUTABLE':
> u'/home/user1/.hashdist/bld/swig/3lpocpbczonv/bin/swig', 2015/02/02
> 12:05:47 - INFO: [package:run_job] u'SWIG_ID':
> u'swig/3lpocpbczonvlk57trvndbrlfugaihyu', 2015/02/02 12:05:47 - INFO:
> [package:run_job] 'SWIG_LIB':
> u'/home/user1/.hashdist/bld/swig/3lpocpbczonv/share/swig/3.0.2',
> 2015/02/02 12:05:47 - INFO: [package:run_job] u'SYMPY_DIR':
> u'/home/user1/.hashdist/bld/sympy/zjk5rig5qkqs', 2015/02/02 12:05:47
> - INFO: [package:run_job] u'SYMPY_ID':
> u'sympy/zjk5rig5qkqsvoykcweg6zk3wasngux4', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'UFL_DIR':
> u'/home/user1/.hashdist/bld/ufl/mw2vvqux3a2h', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'UFL_ID':
> u'ufl/mw2vvqux3a2hbvdsbgpte7ijzoucmhnz', 2015/02/02 12:05:47 - INFO:
> [package:run_job] u'VTK_DIR':
> u'/home/user1/.hashdist/bld/vtk/6jaf25efaug6', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'VTK_ID':
> u'vtk/6jaf25efaug6wymiwxldnzebi5l4gprt', 2015/02/02 12:05:47 - INFO:
> [package:run_job] u'ZLIB_DIR':
> u'/home/user1/.hashdist/bld/zlib/3el5ccejre7b', 2015/02/02 12:05:47 -
> INFO: [package:run_job] u'ZLIB_ID':
> u'zlib/3el5ccejre7bcjqgld5gp6iym4ccd5oe'} 2015/02/02 12:05:49 - INFO:
> [package:run_job] -- The C compiler identification is GNU 4.4.6
> 2015/02/02 12:05:49 - INFO: [package:run_job] -- The CXX compiler
> identification is GNU 4.4.6 2015/02/02 12:05:49 - INFO:
> [package:run_job] -- Check for working C compiler: /usr/bin/cc
> 2015/02/02 12:05:49 - INFO: [package:run_job] -- Check for working C
> compiler: /usr/bin/cc -- works 2015/02/02 12:05:49 - INFO:
> [package:run_job] -- Detecting C compiler ABI info 2015/02/02
> 12:05:50 - INFO: [package:run_job] -- Detecting C compiler ABI info -
> done 2015/02/02 12:05:50 - INFO: [package:run_job] -- Check for
> working CXX compiler: /usr/bin/c++ 2015/02/02 12:05:50 - INFO:
> [package:run_job] -- Check for working CXX compiler: /usr/bin/c++ --
> works 2015/02/02 12:05:50 - INFO: [package:run_job] -- Detecting CXX
> compiler ABI info 2015/02/02 12:05:50 - INFO: [package:run_job] --
> Detecting CXX compiler ABI info - done 2015/02/02 12:05:50 - INFO:
> [package:run_job] CMake Error at CMakeLists.txt:25 (message):
> 2015/02/02 12:05:50 - INFO: [package:run_job] GCC version must be at
> least 4.6 (for sufficient C++11 support. You have
> 2015/02/02 12:05:50 - INFO: [package:run_job] version 4.4.6
> 2015/02/02 12:05:50 - INFO: [package:run_job]
> 2015/02/02 12:05:50 - INFO: [package:run_job]
> 2015/02/02 12:05:50 - INFO: [package:run_job] -- Configuring
> incomplete, errors occurred!
> 2015/02/02 12:05:50 - INFO: [package:run_job] See also
> "/home/user1/.hashdist/tmp/dolfin-sd2jntuwgyab/_build/CMakeFiles/CMakeOutput.log".
> 2015/02/02 12:05:50 - ERROR: [package:run_job] Command '[u'/bin/bash',
> '_hashdist/build.sh']' returned non-zero exit status 1
> 2015/02/02 12:05:50 - ERROR: [package:run_job] command failed
> (code=1); raising
>
> It seems that the problem comes from the GCC version. On this cluster,
> several versions of gcc are available (gcc-4.7.2, gcc-4.8.2 and
> gcc-4.9.1) but when I try to load them and rerun the fenics
> installation, I still get the same error...
>
> What would be the way to specify which GCC version to use?
You have to customize the receipt. See for instance
https://github.com/hashdist/hashstack/blob/master/examples/fenics.abel.gnu.yaml
I think you can do something like
#clone hashdist, hashstack
cd hashstack
cp examples/fenics.abel.gnu.yaml default.yaml
edit default.yaml
hit build
Jan
>
> Thank you for your help!
>
> On Mon, Feb 2, 2015 at 2:39 PM, Johannes Ring <[email protected]>
> wrote:
>
> >
> > On Feb 2, 2015 9:31 PM, "Jan Blechta" <[email protected]>
> > wrote:
> > >
> > > On Mon, 2 Feb 2015 12:29:44 -0600
> > > "Laboure, Vincent M" <[email protected]> wrote:
> > >
> > > > By changing the python version I am using, the download indeed
> > > > starts! Thanks Jan!
> > > >
> > > > After downloading a bunch of stuff (lapack, petsc, etc.), it
> > > > fails to download dolfin and returns the following error:
> > > >
> > > > Downloading
> > > >
> > https://bitbucket.org/fenics-project/dolfin/downloads/dolfin-1.5.0.tar.gz.
> > ..
> > > > [=========================] 100.0% (9.2MB of 9.2MB) 8.488MB/s
> > > > ETA 0s [dolfin] Building dolfin/sd2jntuwgyab, follow log with:
> > > > [dolfin] tail
> > > > -f /home/user1/.hashdist/tmp/dolfin-sd2jntuwgyab/build.log
> > > > [dolfin|ERROR] Command '[u'/bin/bash', '_hashdist/build.sh']'
> > > > returned non-zero exit status 1 [dolfin|ERROR] command failed
> > > > (code=1); raising
> > > >
> > > > Any idea what this could be due to? I have looked into
> > > > /home/user1/.hashdist/tmp/dolfin-sd2jntuwgyab/_hashdist/build.sh
> > > > but I couldn't figure out what caused this error...
> > >
> > > Post this file, please.
> >
> > I think the interesting file is the build.log:
> >
> > /home/user1/.hashdist/tmp/dolfin-sd2jntuwgyab/build.log.
> >
> > Johannes
> >
> > > Jan
> > >
> > > >
> > > > Thanks a lot!
> > > >
> > > >
> > > > On Sat, Jan 31, 2015 at 6:58 AM, Jan Blechta
> > > > <[email protected]> wrote:
> > > >
> > > > > This seems like this issue
> > > > > https://github.com/hashdist/hashdist/issues/83
> > > > >
> > > > > Jan
> > > > >
> > > > >
> > > > > On Tue, 27 Jan 2015 17:31:46 -0600
> > > > > "Laboure, Vincent M" <[email protected]> wrote:
> > > > >
> > > > > > Hello,
> > > > > >
> > > > > > Now that I have FEniCS 1.5 working on my local machine, I am
> > > > > > eager to install it on a cluster to run bigger problems.
> > > > > >
> > > > > > Since I don't have the administrative privileges, I have
> > > > > > been trying to use fenics-install.sh typing:
> > > > > >
> > > > > > curl -s http://fenicsproject.org/fenics-install.sh | bash
> > > > > >
> > > > > > I tried on two different clusters (Red Hat Enterprise Linux
> > > > > > Server release 6.3 for the first one and 6.5 for the second
> > > > > > one) from two completely different institutions. Both
> > > > > > returns the same error:
> > > > > >
> > > > > >
> > > > > >
> > > > > > --2015-01-27 17:07:50--
> > > > > > http://fenicsproject.org/fenics-install.sh Resolving
> > > > > > fenicsproject.org... 82.118.24.73 Connecting to
> > > > > > fenicsproject.org|82.118.24.73|:80... connected. HTTP
> > > > > > request sent, awaiting response... 200 OK Length: 6275
> > > > > > (6.1K) [text/x-sh] Saving to: “STDOUT”
> > > > > >
> > > > > > 100%[======================================>] 6,275
> > > > > > --.-K/s in 0s
> > > > > >
> > > > > > Created temporary directory /tmp/fenics-install.dlAW9R for
> > > > > > FEniCS installation.
> > > > > >
> > > > > > Downloading HashDist...
> > > > > > 2015-01-27 17:07:50 (30.9 MB/s) - written to stdout
> > > > > > [6275/6275]
> > > > > >
> > > > > > Initialized empty Git repository in
> > > > > > /tmp/fenics-install.dlAW9R/hashdist/.git/
> > > > > > remote: Counting objects: 4775, done.
> > > > > > remote: Total 4775 (delta 0), reused 0 (delta 0)
> > > > > > Receiving objects: 100% (4775/4775), 2.13 MiB | 1.10 MiB/s,
> > > > > > done. Resolving deltas: 100% (2889/2889), done.
> > > > > >
> > > > > > Downloading HashStack...
> > > > > > Initialized empty Git repository in
> > > > > > /tmp/fenics-install.dlAW9R/hashstack/.git/
> > > > > > remote: Counting objects: 5852, done.
> > > > > > remote: Compressing objects: 100% (8/8), done.
> > > > > > remote: Total 5852 (delta 2), reused 0 (delta 0)
> > > > > > Receiving objects: 100% (5852/5852), 1.12 MiB | 963 KiB/s,
> > > > > > done. Resolving deltas: 100% (3460/3460), done.
> > > > > >
> > > > > > Downloading FEniCS Install...
> > > > > > Initialized empty Git repository in
> > > > > > /tmp/fenics-install.dlAW9R/fenics-developer-tools/.git/
> > > > > > remote: Counting objects: 138, done.
> > > > > > remote: Compressing objects: 100% (133/133), done.
> > > > > > remote: Total 138 (delta 72), reused 0 (delta 0)
> > > > > > Receiving objects: 100% (138/138), 92.18 KiB, done.
> > > > > > Resolving deltas: 100% (72/72), done.
> > > > > >
> > > > > > patching file pkgs/petsc/petsc.py
> > > > > > patching file pkgs/petsc/petsc.yaml
> > > > > > Ready to build FEniCS. This may take about 2 hours.
> > > > > >
> > > > > > The following build types are supported:
> > > > > >
> > > > > > [0] development version of FEniCS [default]
> > > > > > [1] latest stable version of FEniCS, currently 1.5
> > > > > > [2] only dependencies, including e.g. MPI, PETSc, Swig,
> > > > > > Boost
> > > > > >
> > > > > > Please select build type [0, 1, 2]: 1
> > > > > > Using HashStack profile fenics.Linux.yaml.
> > > > > >
> > > > > > Stable build requested.
> > > > > >
> > > > > > Starting build...
> > > > > >
> > > > > > Directory ba created.
> > > > > > Directory bld created.
> > > > > > Directory src created.
> > > > > > Directory db created.
> > > > > > Directory cache created.
> > > > > > Directory gcroots created.
> > > > > > Default configuration file /home/user1/.hashdist/config.yaml
> > > > > > written. Downloading
> > > > > >
> > http://releases.nixos.org/patchelf/patchelf-0.8/patchelf-0.8.tar.bz2...
> > > > > > [=========================] 100.0% (0.1MB of 0.1MB)
> > > > > > 0.223MB/s ETA 0s [patchelf] Building patchelf/k3rloj265ogt,
> > > > > > follow log with: [patchelf] tail -f
> > > > > > /home/user1/.hashdist/tmp/patchelf-k3rloj265ogt/build.log
> > > > > > Downloading
> > > > > >
> > https://sourceforge.net/projects/pcre/files/pcre/8.34/pcre-8.34.tar.bz2.
> > > > > ..
> > > > > > [ERROR] urllib failed to download (reason: unknown url type:
> > > > > > https):
> > > > > >
> > https://sourceforge.net/projects/pcre/files/pcre/8.34/pcre-8.34.tar.bz2
> > > > > > Downloading
> > > > > >
> > https://sourceforge.net/projects/pcre/files/pcre/8.34/pcre-8.34.tar.bz2.
> > > > > ..
> > > > > > [ERROR] urllib failed to download (reason: unknown url type:
> > > > > > https):
> > > > > >
> > https://sourceforge.net/projects/pcre/files/pcre/8.34/pcre-8.34.tar.bz2
> > > > > > Downloading
> > > > > >
> > https://sourceforge.net/projects/pcre/files/pcre/8.34/pcre-8.34.tar.bz2.
> > > > > ..
> > > > > > [ERROR] urllib failed to download (reason: unknown url type:
> > > > > > https):
> > > > > >
> > https://sourceforge.net/projects/pcre/files/pcre/8.34/pcre-8.34.tar.bz2
> > > > > > [CRITICAL] You may wish to check your Internet connection
> > > > > > or the remote server
> > > > > >
> > > > > >
> > > > > > Does anybody know what the problem could be?
> > > > > >
> > > > > > Many thanks!
> > > > >
> > > > >
> > >
> > > _______________________________________________
> > > fenics-support mailing list
> > > [email protected]
> > > http://fenicsproject.org/mailman/listinfo/fenics-support
> >
> >
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