Dear all,
I got a problem when trying to install latest coot on mac via Fink. Below
is the error message:
g++ -o scitbx/sparse/tests/tst_sparse -w scitbx/sparse/tests/tst_sparse.o
-Llib -Lsource/lib
-L/sw/src/fink.build/ccp4-6.3.0-5/ccp4-6.3.0/lib/cctbx/cctbx_sources/lib
-L/sw/src/fink.build/ccp4-6.3.0-5/ccp4-6.3.0/lib/cctbx/cctbx_sources/cctbx_project/lib
scons: done building targets.
usr+sys time: 26.58 seconds
wall clock time: 8 minutes 13.53 seconds (493.53 seconds total)
cd exe
cp phaser $CCP4/bin/.
cd $CCP4
# rapper manual install
if [[ -x src/rapper/bin/rapper ]]; then
cp src/rapper/bin/rapper $CCP4/bin/.
cp src/rapper/lib/libcord.1.0.3.dylib $CCP4/lib/libcord.1.dylib
cp src/rapper/lib/libgc.1.0.3.dylib $CCP4/lib/libgc.1.dylib
cp src/rapper/lib/libxml2.2.dylib $CCP4/lib/libxml2.2.dylib
/bin/rm -rf src/rapper/lib/*.dylib
mkdir -p share/rapper
cp src/rapper/LOOP/params.xml share/rapper/.
cp -R src/rapper/data share/rapper/.
fi
export DYLD_LIBRARY_PATH=$CLIB
cd $CLIB/libccp4
gfortran -m64 -fno-second-underscore -O2 -fno-second-underscore
-L$CLIB -o data/fontpack data/fontpack.o -lccp4f -lccp4c
cd data
./fontpack
At line 12 of file data/fontpack.f (unit = 10, file = 'fort.10')
Fortran runtime error: End of file
### execution of /tmp/fink.gLmIu failed, exit code 2
### execution of /tmp/fink.yRC8F failed, exit code 2
Removing runtime build-lock...
Removing build-lock package...
/sw/bin/dpkg-lockwait -r fink-buildlock-ccp4-6.3.0-5
(Reading database ... 128422 files and directories currently installed.)
Removing fink-buildlock-ccp4-6.3.0-5 ...
Failed: phase installing: ccp4-6.3.0-5 failed
Before reporting any errors, please run "fink selfupdate" and try again.
If you continue to have issues, please check to see if the FAQ on Fink's
website solves the problem. If not, ask on one (not both, please) of
these mailing lists:
The Fink Users List <fink-us...@lists.sourceforge.net>
The Fink Beginners List <fink-beginners@lists.sourceforge.net>,
with a carbon copy to the maintainer:
W. G. Scott <wgsc...@users.sourceforge.net>
Note that this is preferable to emailing just the maintainer directly,
since most fink package maintainers do not have access to all possible
hardware and software configurations.
Please try to include the complete error message in your report. This
generally consists of a compiler line starting with e.g. "gcc" or "g++"
followed by the actual error output from the compiler.
Also include the following system information:
Package manager version: 0.34.8
Distribution version: selfupdate-rsync Sun May 19 20:14:25 2013, 10.8,
x86_64
Trees: local/main stable/main local/injected
Xcode.app: 4.6.2
Xcode command-line tools: 4.6.0.0.1.1365549073
ccp4-6.3.0-5 is set to build with only one job.
--
Best wishes,
Jinyi Zhu
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