On 5/19/13 6:22 PM, Jinyi Zhu wrote: > Dear all, > > I got a problem when trying to install latest coot on mac via Fink. > Below is the error message: > > g++ -o scitbx/sparse/tests/tst_sparse -w > scitbx/sparse/tests/tst_sparse.o -Llib -Lsource/lib > -L/sw/src/fink.build/ccp4-6.3.0-5/ccp4-6.3.0/lib/cctbx/cctbx_sources/lib > -L/sw/src/fink.build/ccp4-6.3.0-5/ccp4-6.3.0/lib/cctbx/cctbx_sources/cctbx_project/lib > scons: done building targets. > usr+sys time: 26.58 seconds > wall clock time: 8 minutes 13.53 seconds (493.53 seconds total) > cd exe > cp phaser $CCP4/bin/. > > cd $CCP4 > > # rapper manual install > if [[ -x src/rapper/bin/rapper ]]; then > cp src/rapper/bin/rapper $CCP4/bin/. > cp src/rapper/lib/libcord.1.0.3.dylib $CCP4/lib/libcord.1.dylib > cp src/rapper/lib/libgc.1.0.3.dylib $CCP4/lib/libgc.1.dylib > cp src/rapper/lib/libxml2.2.dylib $CCP4/lib/libxml2.2.dylib > /bin/rm -rf src/rapper/lib/*.dylib > mkdir -p share/rapper > cp src/rapper/LOOP/params.xml share/rapper/. > cp -R src/rapper/data share/rapper/. > fi > > > export DYLD_LIBRARY_PATH=$CLIB > cd $CLIB/libccp4 > gfortran -m64 -fno-second-underscore -O2 -fno-second-underscore > -L$CLIB -o data/fontpack data/fontpack.o -lccp4f -lccp4c > cd data > ./fontpack > At line 12 of file data/fontpack.f (unit = 10, file = 'fort.10') > Fortran runtime error: End of file > ### execution of /tmp/fink.gLmIu failed, exit code 2 > ### execution of /tmp/fink.yRC8F failed, exit code 2 > Removing runtime build-lock... > Removing build-lock package... > /sw/bin/dpkg-lockwait -r fink-buildlock-ccp4-6.3.0-5 > (Reading database ... 128422 files and directories currently installed.) > Removing fink-buildlock-ccp4-6.3.0-5 ... > Failed: phase installing: ccp4-6.3.0-5 failed > > Before reporting any errors, please run "fink selfupdate" and try again. > > If you continue to have issues, please check to see if the FAQ on Fink's > website solves the problem. If not, ask on one (not both, please) of > these mailing lists: > > The Fink Users List <fink-us...@lists.sourceforge.net > <mailto:fink-us...@lists.sourceforge.net>> > The Fink Beginners List <fink-beginners@lists.sourceforge.net > <mailto:fink-beginners@lists.sourceforge.net>>, > > with a carbon copy to the maintainer: > > W. G. Scott <wgsc...@users.sourceforge.net > <mailto:wgsc...@users.sourceforge.net>> > > Note that this is preferable to emailing just the maintainer directly, > since most fink package maintainers do not have access to all possible > hardware and software configurations. > > Please try to include the complete error message in your report. This > generally consists of a compiler line starting with e.g. "gcc" or "g++" > followed by the actual error output from the compiler. > > Also include the following system information: > Package manager version: 0.34.8 > Distribution version: selfupdate-rsync Sun May 19 20:14:25 2013, 10.8, > x86_64 > Trees: local/main stable/main local/injected > Xcode.app: 4.6.2 > Xcode command-line tools: 4.6.0.0.1.1365549073 > ccp4-6.3.0-5 is set to build with only one job. > > -- > Best wishes, > > Jinyi Zhu > >
What do you get from running "which gfortran" in a terminal? -- Alexander Hansen, Ph.D. Fink User Liaison My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ AlienVault Unified Security Management (USM) platform delivers complete security visibility with the essential security capabilities. Easily and efficiently configure, manage, and operate all of your security controls from a single console and one unified framework. Download a free trial. http://p.sf.net/sfu/alienvault_d2d _______________________________________________ Fink-beginners mailing list Fink-beginners@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.apple.fink.beginners Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-beginners
