On 26 Oct 2014, at 01:13, Alexander Hansen <alexanderk.han...@gmail.com> wrote:
> On 10/25/14, 3:16 PM, Viv Kendon wrote: >> >> On 25 Oct 2014, at 22:43, Viv Kendon <v...@trellick.net> wrote: >> >>>> <snip> >>> >>> On 25 Oct 2014, at 22:01, Alexander Hansen <alexanderk.han...@gmail.com> >>> wrote: >>>> >>>> The if-then that you fixed was _supposed_ to copy that over for 10.9 and >>>> later. As a workaround, maybe start a rebuild of octave364-atlas-x11, >>>> stop it after the patch phase, and manually do a >>>> >>>> sudo cp >>>> /sw/src/fink.build/octave-3.6.4-11/octave-3.6.4/liboctave/libcxx-fix.h >>>> /sw/include/octave-3.6.4/octave/ >>> >>> Many thanks, I did that, then restarted fink install bundle-octave-atlas. >>> It went through the oct364 packages in alphabetical order, so here is how >>> it dies for java: >>> >>> ans = /sw/src/fink.build/java-oct364-1.2.9-3/bld/share/octave/3.6.4/packages >>> mkdir (/var/tmp/oct-l9vVbi) >>> untar (./java.tar, /var/tmp/oct-l9vVbi) >>> >>> Error while trying to install Java package: >>> JAVA_HOME environment variable does not properly point to a JDK >>> Hint: >>> JAVA_HOME should usually be set such that either: >>> (on *nix:) >>> <JAVA_HOME>/jre/lib/<arch>/client/ contains libjvm.so (file or symlink) >>> (on OSX:) >>> <JAVA_HOME>/../Libraries/ contains a file libclient.dylib >>> (on Windows:) >>> <JAVA_HOME>/jre/lib/<arch>/ contains a file jvm.cfg >>> (<arch> depends on your system hardware, can be i386, x86_64, alpha, arm, >>> ...) >>> >>> Use forward slashes as path separator, also on Windows >>> Aborting pkg install >>> error: called from 'pre_install' in file >>> /private/var/tmp/oct-l9vVbi/java/pre_install.m near line 115, column 5 >>> error: called from: >>> error: /sw/share/octave/3.6.4/m/pkg/pkg.m at line 827, column 5 >>> error: /sw/share/octave/3.6.4/m/pkg/pkg.m at line 383, column 9 >>> error: /sw/src/fink.build/java-oct364-1.2.9-3/java/octave-forge-comp at >>> line 4, column 1 >>> >>> I then manually verified that octcdf-nc4-oct364 now installs fine. >>> >>> Will I need to manually copy libcxx-fix.h for octave382 as well? And is >>> the file identical to the octave364 copy, or do I need to start a rebuild >>> for octave382 to get the corresponding file? >>> >> >> I tried a few oct832 packages (without doing anything about libcxx-fix.h for >> octave382) and they all seem to die in the same way with a java error that >> is very different from the above: >> >> mkdir -p bld/share/octave/3.8.2/packages bld/lib/octave/3.8.2/packages >> `which xvfb-run` >> /sw/src/fink.build/optiminterp-atlas-oct382-0.3.4-3/optiminterp/octave-forge-comp >> which xvfb-run >> No Java runtime present, requesting install. >> 2014-10-25 23:07:33.340 octave-cli-3.8.2[45245:d07] JLRequestRuntimeInstall: >> Error calling: CFMessagePortCreateRemote >> ### execution of /tmp/fink.zx8W6 failed, exit code 97 >> Removing runtime build-lock... >> Removing build-lock package... >> /sw/bin/dpkg-lockwait -r fink-buildlock-optiminterp-atlas-oct382-0.3.4-3 >> >> >> java -version >> java version "1.7.0_51" >> Java(TM) SE Runtime Environment (build 1.7.0_51-b13) >> Java HotSpot(TM) 64-Bit Server VM (build 24.51-b03, mixed mode) >> >> Package manager version: 0.38.1 >> Distribution version: selfupdate-rsync Sat Oct 25 22:57:26 2014, 10.9, x86_64 >> Trees: local/main stable/main >> Xcode.app: 6.0.1 >> Xcode command-line tools: 6.0.0.0.1.1410400753 >> >> >> Anyway, it is end of the day here. Happy to keep testing tomorrow, if it >> would be useful. > > Thanks for testing! You are welcome, happy to help. > The libcxx-fix.h files are the same for both Octave versions. It may well be > present for your octave382 build, though--more bad shell scripting in the 364 > version from me which wasn't present in the 382 version. I do indeed have the 382 version correctly installed by fink. I just rebuilt octave364-atlas-x11 since it showed as outdated but libcxx-fix.h still did not get installed by fink as it should be (I moved my manually copied version aside before rebuilding). And dpkg -S libcxx-fix.h octave382-atlas-x11-dev: /sw/include/octave-3.8.2/octave/libcxx-fix.h only reports the 382 version. Let me know if I can test/try anything else. many thanks, — Viv ------------------------------------------------------------------------------ _______________________________________________ Fink-users mailing list Fink-users@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
