On 10/26/14, 4:34 AM, Viv Kendon wrote: > > On 26 Oct 2014, at 01:13, Alexander Hansen <alexanderk.han...@gmail.com> > wrote: > >> On 10/25/14, 3:16 PM, Viv Kendon wrote: >>> >>> On 25 Oct 2014, at 22:43, Viv Kendon <v...@trellick.net> wrote: >>> >>>>> <snip> >>>> >>>> On 25 Oct 2014, at 22:01, Alexander Hansen <alexanderk.han...@gmail.com> >>>> wrote: >>>>> >>>>> The if-then that you fixed was _supposed_ to copy that over for 10.9 and >>>>> later. As a workaround, maybe start a rebuild of octave364-atlas-x11, >>>>> stop it after the patch phase, and manually do a >>>>> >>>>> sudo cp >>>>> /sw/src/fink.build/octave-3.6.4-11/octave-3.6.4/liboctave/libcxx-fix.h >>>>> /sw/include/octave-3.6.4/octave/ >>>> >>>> Many thanks, I did that, then restarted fink install bundle-octave-atlas. >>>> It went through the oct364 packages in alphabetical order, so here is how >>>> it dies for java: >>>> >>>> ans = >>>> /sw/src/fink.build/java-oct364-1.2.9-3/bld/share/octave/3.6.4/packages >>>> mkdir (/var/tmp/oct-l9vVbi) >>>> untar (./java.tar, /var/tmp/oct-l9vVbi) >>>> >>>> Error while trying to install Java package: >>>> JAVA_HOME environment variable does not properly point to a JDK >>>> Hint: >>>> JAVA_HOME should usually be set such that either: >>>> (on *nix:) >>>> <JAVA_HOME>/jre/lib/<arch>/client/ contains libjvm.so (file or symlink) >>>> (on OSX:) >>>> <JAVA_HOME>/../Libraries/ contains a file libclient.dylib >>>> (on Windows:) >>>> <JAVA_HOME>/jre/lib/<arch>/ contains a file jvm.cfg >>>> (<arch> depends on your system hardware, can be i386, x86_64, alpha, >>>> arm, ...) >>>> >>>> Use forward slashes as path separator, also on Windows >>>> Aborting pkg install >>>> error: called from 'pre_install' in file >>>> /private/var/tmp/oct-l9vVbi/java/pre_install.m near line 115, column 5 >>>> error: called from: >>>> error: /sw/share/octave/3.6.4/m/pkg/pkg.m at line 827, column 5 >>>> error: /sw/share/octave/3.6.4/m/pkg/pkg.m at line 383, column 9 >>>> error: /sw/src/fink.build/java-oct364-1.2.9-3/java/octave-forge-comp at >>>> line 4, column 1 >>>> >>>> I then manually verified that octcdf-nc4-oct364 now installs fine. >>>> >>>> Will I need to manually copy libcxx-fix.h for octave382 as well? And is >>>> the file identical to the octave364 copy, or do I need to start a rebuild >>>> for octave382 to get the corresponding file? >>>> >>> >>> I tried a few oct832 packages (without doing anything about libcxx-fix.h >>> for octave382) and they all seem to die in the same way with a java error >>> that is very different from the above: >>> >>> mkdir -p bld/share/octave/3.8.2/packages bld/lib/octave/3.8.2/packages >>> `which xvfb-run` >>> /sw/src/fink.build/optiminterp-atlas-oct382-0.3.4-3/optiminterp/octave-forge-comp >>> which xvfb-run >>> No Java runtime present, requesting install. >>> 2014-10-25 23:07:33.340 octave-cli-3.8.2[45245:d07] >>> JLRequestRuntimeInstall: Error calling: CFMessagePortCreateRemote >>> ### execution of /tmp/fink.zx8W6 failed, exit code 97 >>> Removing runtime build-lock... >>> Removing build-lock package... >>> /sw/bin/dpkg-lockwait -r fink-buildlock-optiminterp-atlas-oct382-0.3.4-3 >>> >>> >>> java -version >>> java version "1.7.0_51" >>> Java(TM) SE Runtime Environment (build 1.7.0_51-b13) >>> Java HotSpot(TM) 64-Bit Server VM (build 24.51-b03, mixed mode) >>> >>> Package manager version: 0.38.1 >>> Distribution version: selfupdate-rsync Sat Oct 25 22:57:26 2014, 10.9, >>> x86_64 >>> Trees: local/main stable/main >>> Xcode.app: 6.0.1 >>> Xcode command-line tools: 6.0.0.0.1.1410400753 >>> >>> >>> Anyway, it is end of the day here. Happy to keep testing tomorrow, if it >>> would be useful. >> >> Thanks for testing! > > You are welcome, happy to help. > >> The libcxx-fix.h files are the same for both Octave versions. It may well >> be present for your octave382 build, though--more bad shell scripting in the >> 364 version from me which wasn't present in the 382 version. > > I do indeed have the 382 version correctly installed by fink. I just rebuilt > octave364-atlas-x11 since it showed as outdated but libcxx-fix.h still did > not get installed by fink as it should be (I moved my manually copied version > aside before rebuilding). And > > dpkg -S libcxx-fix.h > octave382-atlas-x11-dev: /sw/include/octave-3.8.2/octave/libcxx-fix.h > > only reports the 382 version. > > Let me know if I can test/try anything else. > > many thanks, > — Viv > >
Anything you want to build would be helpful. :-) I fixed the octave364 build last night so it installs everything it should. I'm in the process of getting octave382 up on 10.10 with tweaked dependencies to avoid installing Apple's legacy Java to see what happens there. -- Alexander Hansen, Ph.D. Fink User Liaison My package updates: http://finkakh.wordpress.com/ ------------------------------------------------------------------------------ _______________________________________________ Fink-users mailing list Fink-users@lists.sourceforge.net List archive: http://news.gmane.org/gmane.os.macosx.fink.user Subscription management: https://lists.sourceforge.net/lists/listinfo/fink-users
