Ah, sorry-- that too: tcsh 6.18.01. (The command, which I just sent in a previous message, was as follows:
recon-all -i /home/hurry01/r/resdep_mri_data/resdep014/265000-10-1.dcm -s resdep214 -all & ) Heather On Wed, Aug 7, 2013 at 12:42 PM, Bruce Fischl <[email protected]>wrote: > and what shell are you using > On Wed, 7 Aug 2013, Douglas N Greve wrote: > > > what is your command line? > > > > > > > > > > On 08/07/2013 10:19 AM, Heather L. Urry wrote: > >> Hi folks, > >> > >> When issuing a recon-all command, I'm seeing the following message: > >> > >> set: Variable name must contain alphanumeric characters > >> > >> recon-all stalls and doesn't move forward (doesn't even create the > >> subject directory). > >> > >> I'm using Freesurfer 5.3.0 > >> (freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0) on Ubuntu 12.04.2. > >> In fact, we just upgraded to this version of Ubuntu from an older > >> version of Mandriva and to this latest version of Freesurfer. > >> recon-all did not produce this message before these two upgrades. Any > >> help you can offer would be most appreciated! Thanks in advance. > >> > >> Best, > >> > >> Heather > >> > >> -- > >> Heather L. Urry, Ph.D. > >> Department of Psychology > >> Tufts University > >> 490 Boston Avenue > >> Medford, MA 02155 > >> > >> email: [email protected] <mailto:[email protected]> > >> phone: 617-627-3733 > >> fax: 617-627-3181 > >> > >> http://ase.tufts.edu/psychology/ebbl > >> > >> > >> _______________________________________________ > >> Freesurfer mailing list > >> [email protected] > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- Heather L. Urry, Ph.D. Department of Psychology Tufts University 490 Boston Avenue Medford, MA 02155 email: [email protected] phone: 617-627-3733 fax: 617-627-3181 http://ase.tufts.edu/psychology/ebbl
_______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
