Hi Al,
can you run mri_info on 100307_3T_AFI.nii? Is that an AFI scan? I'm not
familiar with their naming convention. I'll cc Matt Glasser who can
probably help.
cheers
Bruce
On Wed, 22 Jan 2014, Alfred Ochs wrote:
Hello folks,
I am attempting to run FreeSurfer (v5.1) on a downloaded NifTI structural T1
MRI from the Human Connectome Project, in particular
100307_3T_AFI.nii. Unless I am mistaken, their preprocessed data doesn't
include aseg data, at least identified in a manner I am familiar
with. Nevertheless, recon-all -s 100307_cs -all reports:
ERROR: input(s) cannot have multiple frames!
/Applications/freesurfer/subjects/100307_cs/mri/orig/001.mgz has 2 frames.
How do I work around this?
Thanks, Al
Alfred L. Ochs, Ph.D.
Virginia Institute for Neuropsychiatry
Richmond, Virginia
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