Hi Freesurfers,

   I have tried to obtain a flat surface as described by the upper part
(full cortex) of the following page:

   http://freesurfer.net/fswiki/FreeSurferOccipitalFlattenedPatch

   However, I failed to load the results in freeview (it took forever), nor
can I read in matlab with read_surf. The error in matlab is as following
======
Error using reshape
To RESHAPE the number of elements must not change.

Error in read_surf (line 77)
vertex_coords = reshape(vertex_coords, 3, vnum)' ;
======
   Thus I suspect in the newly generated surface, the number of vertices in
the header does not meet that indicated by the data. I did sth wrong.

Questions:
1 Is this webpage still up-to-date or I shall try something new to flatten
the surface?
2 Probably there are "frequently made mistakes" during my manual process,
would you please give me a hint? I my case afterwards mris_flatten took 2-3
hours.

btw: the inflated surface is OK either checked by freeview or matlab.

best
Peng
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to