Dear experts,
looking into the output of Freesurfer in this page
https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllOutputFiles
I see that there should be a file named "aparc.DKTatlas+aseg.mgz". Is this
atlas can be generated with the presence of FLAIR images.
When i run recon-all without FLAIR or T2 I don't see this atlas!! Is this atlas
FLAIR -based?
thank you for any clarification
John
> -------- Original Message --------
> Subject: aparc.DKTatlas+aseg.mgz
> Local Time: August 30, 2017 7:49 PM
> UTC Time: August 30, 2017 11:49 PM
> From: john.ande...@protonmail.com
> To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
>
> Dear experts,
> looking into the output of Freesurfer in this page
> https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllOutputFiles
> I see that there should be a file named "aparc.DKTatlas+aseg.mgz". Do I need
> FLAIR images to get this file.
>
> I ran the command recon-all --s subj --all and I can';t find this file
>
> thank you for any clarification
> John
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