Hi Jake

if you upload a subject and send us the voxel coords you are looking at one of us will take a look

cheers
Bruce
On Wed, 13 Sep 2017, Jake Rieke wrote:

We are using Freesurfer v6.0

Biomedical Engineer, Brain Rehabilitation Research CenterMalcolm Randall VA 
Medical Center, 1601 SW
Archer Road, Gainesville, FL 32608
Phone: 1-352-376-1611 ext. 5249, E-mail: jakeri...@gmail.com

On Thu, Sep 7, 2017 at 6:17 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu> 
wrote:
      what version of FS are you using?


      On 09/07/2017 03:19 PM, Aidan Murphy wrote:
      >
      > We're running QA on Freesurfer's aseg and aparc+aseg volumes. On the
      > aparc volume we're noticing fairly large unknown regions in what
      > should be entorhinal cortex, specifically where it comes up against
      > the hippocampus and amygdala. The aseg volumes label these unknown
      > regions as cortex. I've searched the archives and haven't been able to
      > find anything similar from recent years.
      >
      > I've attached some axial screenshots of the raw T1, the aseg and the
      > aparc+aseg.
      >
      >
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