sorry, can you clarify what your question is?
On Sat, 16 Sep 2017, Fereshte
wrote:
Dear FreeSurfer developers
I couldn't find the mentioned mris_volume in the commands. Shall i use
mri_vol2surf or something?
Looking forward to hearing from you!
On Tue, Sep 5, 2017 at 9:46 AM Fereshte <fereshte.ramez...@gmail.com> wrote:
Hi Bruce,
Thank you for your replies.
Cheers
On Tue, Sep 5, 2017 at 4:52 AM Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote:
Hi Fereshte
the algorithm is documented in the recon1 1999 NeuroImage and 2000 PNAS
papers
cheers
Bruce
On Mon, 4 Sep 2017, Fereshte wrote:
> What's the algorithm used to expand inner cortical boundary ( to
achieve the
outer cortical boundary
> in pial surface) in FreeSurfer?
> On Mon, Sep 4, 2017 at 9:58 PM Bruce Fischl
<fis...@nmr.mgh.harvard.edu> wrote:
> it will give the interior volume of whatever surface you give it
as a
> command line argument.
>
> On Mon, 4 Sep 2017, Fereshte
> wrote:
>
> > Using the Pial surface; Does it mean mris_volume will give the
inner
cortical boundary
> of the
> > surface and not the outer boundary?
> > Sincerely,
> > Fereshte Ramezani
> > On Mon, Sep 4, 2017 at 9:53 PM Fereshte
<fereshte.ramez...@gmail.com>
wrote:
> >
> > On Mon, Sep 4, 2017 at 6:46 PM Bruce Fischl
<fis...@nmr.mgh.harvard.edu> wrote:
> > sure, mris_volume will give you the interior volume of
any closed
surface
> > using the divergence formula. Note that this is *not* the
volume
of the
> > ribbon but rather the volume of the entire interior
> >
> > cheers
> > Bruce
> >
> >
> > On Mon, 4 Sep 2017, Fereshte wrote:
> >
> > > Hello FreeSurfer developersIs it possible to have the
volume of
pial surface
> in
> > FreeSurfer?
> > >
> > >_______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> >
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> >
> > The information in this e-mail is intended only for the
person to
whom it is
> > addressed. If you believe this e-mail was sent to you in
error and
the e-mail
> > contains patient information, please contact the Partners
Compliance HelpLine at
> > http://www.partners.org/complianceline . If the e-mail
was sent to
you in error
> > but does not contain patient information, please contact
the
sender and properly
> > dispose of the e-mail.
> >
> >
> >_______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
> The information in this e-mail is intended only for the person to
whom it
is
> addressed. If you believe this e-mail was sent to you in error
and the
e-mail
> contains patient information, please contact the Partners
Compliance
HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent
to you in
error
> but does not contain patient information, please contact the
sender and
properly
> dispose of the e-mail.
>
>
>_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it
is
addressed. If you believe this e-mail was sent to you in error and the
e-mail
contains patient information, please contact the Partners Compliance
HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in
error
but does not contain patient information, please contact the sender and
properly
dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
