all of our data is transformed to be 256^3 before processing unless you
specify otherwise. If you want to undo it, you can use the -rl <volume
name> switch in mri_convert ("reslice like"). If it is an aseg volume make
sure that you specify the resample type as nearest neighbor with -rt
nearest
Note also that all of our binaries can write nifti (including mri_binarize)
cheers
Bruce
On Wed, 4 Oct 2017, Fereshte
wrote:
Dear Experts,I've made some volumes from aseg.mgz using mri_binarize and then
used mri_convert to
make nii files. But when i open these files using Mricro i see the original
dimension of the image
has changed ( 181,217,181 to 256,256,256). I have no idea what the problem is.
I'd appreciate your
help.
Many thanks in advance
Best
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