Hi Eugenio, Is it possible to use *quantifyHAsubregions.sh* to write out the three different hippocampal subfield outputs ?
- HBT: the hippocampus is subdivided into head, body and tail. - FS60: it mimics the FreeSurfer 6.0 hippocampal module, i.e., no head/body subdivision for the hippocampal subregions. - CA: the "internal" labels (GC-ML-DG and molecular layer) are absorbed by the CA subfields: GC-ML-DG is absorbed by CA4, and the voxels in the molecular layer are assigned the label of the closest voxel that is neither molecular layer nor background Best Eva
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