thanks Rob
Bruce
On Tue, 19 Jun 2018, Dicamillo, Robert wrote:
I followed up with Ryan off the list one this one yesterday, i.e., he tried one
of the
later dev builds which fixes those lib issues. I think recon-all runs for him
now w/o
the lib errors, but
he is getting a non-zero exit from something else.
- rob
On Jun 19, 2018, at 11:00 AM, Hoopes, Andrew <[email protected]>
wrote:
Hi Ryan, this issue should be fixed in the freesurfer development version, but
as
a temporary fix to get things working in v6, I would suggest disabling SIP and
rerunning:
http://osxdaily.com/2015/10/05/disable-rootless-system-integrity-protection-mac-os-x/
best
Andrew
From: <[email protected]> on behalf of Ryan Flores
<[email protected]>
Reply-To: FS Help <[email protected]>
Date: Monday, June 18, 2018 at 1:07 PM
To: FS Help <[email protected]>
Subject: [Freesurfer] Recon-all exited with errors
External Email - Use Caution
Dear FS developers,
I tried running recon-all using the -parallel flag over the weekend, but to my
surprise they all exited with errors. I’m hoping the problem is something
subtle,
but I’m having trouble understanding the error log (please see attached). Can
someone point out the issue? Thank you for your help.
Best,
Ryan
--
Ryan Flores
Clinical Research Coordinator
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