External Email - Use Caution Hello FreeSurfer experts,
We have a large dataset (n=140) that is being processed through the longitudinal pipeline. We have already generated the cross-sectionals and conducted manual edits to the bases in v5.3.0. What is the latest stage (cross, base, long) at which we are able to re-process our data in v6.0, and retain our manual edits, in order to reap the benefits of v6.0? It appears a similar question was asked about whether or not manual edits from an older version are retained and can be ran through recon-all with the newer version (https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg51197.html), and it appears yes they can. However, since we are using the longitudinal pipeline, we want to confirm the stage at which we can to run recon-all in v6.0. Thank you! Kaley Center for Healthy Minds Waisman Center for Brain Imaging and Behavior University of Wisconsin-Madison
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