Just run recon-all -s subject -segstats and the new ICV should appear in the aseg.stats file
On 11/13/2018 12:08 PM, Gamaliz wrote: > > External Email - Use Caution > > > I have a fewT1 scans that have obvious incorrect registration > to mni_average_305. I opened tkregister2 --s subjid --fstal --surfs > and I am able to fix the registration, but I wonder how to use the ew > registration to recalculate the new ICV. I am interested in doing it > with Freesurfer (as I know I could get the matrix and calculate the > determinant. I guess I will have to save the transform and rerun some > of Freesurfer command to overwrite the old icv value? > > > Thanks > > > Gabriel > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
