Hi Kyung
it's impossible to tell what is going on from a single slice. Typically
the pial surface doesn't settle at the correct spot because the
underlying white is also off. If you tar and gzip the entire subject dir
and upload it to out ftp site together with a set of coordinates that you
think are incorrect we will take a look
cheers
Bruce
On Thu, 29 Nov 2018, 박경일 wrote:
External Email - Use Caution
Dear experts
I met a problem during manual editing. My version is 5.3.
Following FS tutorial, freeview process was run, which loaded T1, brainmask and
apar+aseg images.
Then, I clicked 'voxel edit', checked 'recon-edit' and clicked a part of image
which had been excluded from
cortex (outside the pial line). I saved it and also re-ran the recon-all
process. The saved images were as
follows. I compared the values before and after editing, but, the values of
total cortical volume, e-TIV
and the volume of temporal pole and sup temporal gyrus, were not changed.
I have no idea whether some steps were skipped and why my editing did not
reflect the numerical values of
this areas.
Thanks always.
Sincerely yours
Kyung
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