External Email - Use Caution ---------- Forwarded message --------- From: 박경일 <ideo...@gmail.com> Date: 2018년 12월 1일 (토) 오전 11:27 Subject: Re: [Freesurfer] trouble in manual editing of pial surface To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Thanks for you quick reply. I am uploading a compressed file to filedrop (example1.zip). Which email should be filled up in recipients's email to reach you? Kyung 2018년 11월 30일 (금) 오전 12:34, Bruce Fischl <fis...@nmr.mgh.harvard.edu>님이 작성: > Hi Kyung > > it's impossible to tell what is going on from a single slice. Typically > the pial surface doesn't settle at the correct spot because the > underlying white is also off. If you tar and gzip the entire subject dir > and upload it to out ftp site together with a set of coordinates that you > think are incorrect we will take a look > > cheers > Bruce > On Thu, 29 Nov 2018, 박경일 wrote: > > > > > External Email - Use Caution > > > > Dear experts > > I met a problem during manual editing. My version is 5.3. > > Following FS tutorial, freeview process was run, which loaded T1, > brainmask and apar+aseg images. > > Then, I clicked 'voxel edit', checked 'recon-edit' and clicked a part of > image which had been excluded from > > cortex (outside the pial line). I saved it and also re-ran the recon-all > process. The saved images were as > > follows. I compared the values before and after editing, but, the > values of total cortical volume, e-TIV > > and the volume of temporal pole and sup temporal gyrus, were not changed. > > I have no idea whether some steps were skipped and why my editing did > not reflect the numerical values of > > this areas. > > > > Thanks always. > > > > Sincerely yours > > Kyung > > > >_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Kyung-Il Park, MD, PhD. Professor, Department of Neurology, Seoul National University Hospital; Seoul National University Hospital Healthcare System Gangnam Center. Office: 82-2-2112-5756 / Fax: 82-2-2112-5635 Email: kip...@snuh.org / ideo...@gmail.com -- Kyung-Il Park, MD, PhD. Professor, Department of Neurology, Seoul National University Hospital; Seoul National University Hospital Healthcare System Gangnam Center. Office: 82-2-2112-5756 / Fax: 82-2-2112-5635 Email: kip...@snuh.org / ideo...@gmail.com
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