the cortex.label is built based on a bunch of rules (e.g. surface locations next to the CC are not cortex), and so varies across subject depending on structure size and geometry

cheers
Bruce
On Wed, 27 Feb 2019, 310913949 wrote:


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Hi Freesurfer Pros??
   I  want to know how the label file is generated?Is it the *h.cortex.label  
generated after
mapping the vertices into the space of the fsaverage? If yes, why different 
subjects dont have the
same vertices number of the lh.cortex.label after  reconstruction? If not?? i 
used the command line
??mri_label2label --srcsubject mysubject --srclabel 
mysubject/label/lh.cortex.label --trgsubject
fsaverage --trglabel lh.reg.cortex.label --regmethod surface --hemi lh?? ,that 
i tried to map the
vertices into the space of the fsaverage,but it still have the same 
vertices,why? 
  I am looking forward to your reply!Thanks.

Sincerely,
KK
 

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