External Email - Use Caution Hello，Bruce I attached my subjects. Please help me. Thank you. Abby 2851A_T1_w4.nii <https://drive.google.com/file/d/16rwuarmjHdyV3cImi_Gy0N71aqGytlzO/view?usp=drive_web>
Bruce Fischl <fis...@nmr.mgh.harvard.edu> 于2019年4月18日周四 下午10:53写道： > Hi Abby > > it's hard to tell from the image, but it looks like there is a big I/S > bias field as well as large amounts of pathology. > > If you upload the subject to our ftp site we will take a look > > cheers > Bruce > On Thu, 18 Apr > 2019, Abby > tang wrote: > > > > > External Email - Use Caution > > > > Hello FreeSurfer Developers, > > > > I'm attempting to recon_all my subjects which is .nii file. But I > usually meet this error. > > > > CORRECTING DEFECT 0 (vertices=67, convex hull=73, v0=950) > > After retessellation of defect 0 (v0=950), euler #=20 > (87340,255044,167724) : difference with theory > > (-32) = -52 > > > > CORRECTING DEFECT 1 (vertices=46367, convex hull=8524, v0=962) > > Segmentation fault (core dumped) > > Linux abby-virtual-machine 4.15.0-47-generic #50-Ubuntu SMP Wed Mar 13 > 10:44:52 UTC 2019 x86_64 x86_ > > 64 x86_64 GNU/Linux > > > > recon-all -s 2851A_T1_w4 exited with ERRORS at Thu Apr 18 20:25:16 CST > 2019 > > > > To report a problem, see > http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > > > > I check files in blow command and attached picture. > > > > freeview -v 2851A_T1_w4/mri/norm.mgz -f 2851A_T1_w4/surf/lh.orig.nofix > 2851A_T1_w4/surf/lh.inflated. > > nofix > > > > almost all of subjects go wrong. I need your help. > > > > please give some advises with program statements in detail. > > > > I really appreciate your help > > > > 1) FreeSurfer version: freesurfer-linux-centos7_x86_64-dev.tar.gz > > 2) Platform: ubuntu 18 > > 3) recon-all.log:see attached > > > >_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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