It looks like there might be a very large defect. Try looking at the
wm.mgz and brainmask.mgz and the lh.orig.nofix surface to see if there
is a large part of skull or cerebellum that is encompassed in the
orig.nofix surface
On 3/30/2020 11:26 AM, Wang, Lily wrote:
Hi All,
I have a subject whose T1 quality is quite good but reconstruction
exited with errors so I am not sure what the issue could be. Attached
is the recon-all.log. Could it be that the subject is very old and has
a lot of degeneration?
Thank you,
Lily
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