There is nothing special you have to do. What version of FS do you have?
You still have to source the FS environment. If you can run recon-all,
you should be able to run PETsurfer
On 11/1/2021 12:26 PM, Brusaferri, Ludovica wrote:
Hi!
I have been using freesurfer regularly and I am now trying to
implement a few commands from PETsurfer
https://surfer.nmr.mgh.harvard.edu/fswiki/PetSurfer.
It seems like I cannot use any of the commands listed in the wiki
(such as gtmseg or mri_coreg), although they should be part of the
freesurfer package (as PETsurfer is part of freesurfer). Do I need to
follow a specific pipeline to install the PETsurfer extension? If so,
could you please guide me through?
Thanks so much in advance!
Kindly,
Ludovica
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