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Hello FreeSurfer Developers,
I am using mri_robust_register to register a moving volume to a fixed one. The 
algorithm outputs the rigid transformation in a .lta file. I need to extract 
the rigid parameters (3 rotation angles in degrees and 3 translation parameters 
in millimeters).
However, the transformation in the file doesn't seem right, as the translation 
parameters appear to be very large (I assume the values in the last column of 
the transformation are in millimeters). The moved image doesn’t seem to 
translate by more than a few millimeters.
Is there a command for converting the .lta file into rotation and translation 
parameters? If not, could you provide more information on how to manually 
convert it using the transformation in the .lta file?
Freesurfer version: freesurfer-linux-centos7_x86_64-7.4.1-20230613-7eb8460

Thank you,
Noga

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