Colin;
> Second -and still unsolved- problem: When i try to run a picard tool, I get
> the following exception:
>
> File "/home/hg/Galaxy/galaxy-dist/tools/picard/picard_wrapper.py", line 40
> class PicardBase():
> ^
> SyntaxError: invalid syntax
What version of Python are you running? This appears to be a syntax
error from an older version:
$ python2.7
Python 2.7.1+ (r271:86832, Apr 11 2011, 18:13:53)
[GCC 4.5.2] on linux2
Type "help", "copyright", "credits" or "license" for more
information.
>>> class Test():
...
$ python2.4
Python 2.4.3 (#1, Nov 11 2010, 13:30:19)
[GCC 4.1.2 20080704 (Red Hat 4.1.2-48)] on linux2
Type "help", "copyright", "credits" or "license" for more
information.
>>> class Test():
File "<stdin>", line 1
class Test():
^
SyntaxError: invalid syntax
If you're using 2.4 it's well worth upgrading to 2.6 or 2.7. Hope
this helps,
Brad
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