hi, we are getting the following error migrating from 79 to 80.
curiously, my own galaxy didn't have this problem, but another
developer here was getting this error. i moved him from sqlite to
postgres but that didn't help.
thanks for any assistance,
ed
Migrating 79 -> 80...
galaxy.model.migrate.check INFO 2011-08-31 13:15:31,446
Traceback (most recent call last):
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/web/buildapp.py",
line 82, in app_factory
app = UniverseApplication( global_conf = global_conf, **kwargs )
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/app.py",
line 32, in __init__
create_or_verify_database( db_url, kwargs.get( 'global_conf', {}
).get( '__file__', None ), self.config.database_engine_options )
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/model/migrate/check.py",
line 67, in create_or_verify_database
migrate_to_current_version( engine, db_schema )
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-jeff/lib/galaxy/model/migrate/check.py",
line 125, in migrate_to_current_version
schema.runchange( ver, change, changeset.step )
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/schema.py",
line 184, in runchange
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
line 100, in run
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
line 112, in _func
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
line 108, in module
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/script/py.py",
line 65, in verify_module
File
"/house/groupdirs/genetic_analysis/jfroula/Projects/Galaxy/galaxy-depot/eggs/sqlalchemy_migrate-0.5.4-py2.6.egg/migrate/versioning/util/importpath.py",
line 12, in import_path
File "lib/galaxy/model/migrate/versions/0080_quota_tables.py", line
29, in <module>
Column( "bytes", BigInteger ),
NameError: name 'BigInteger' is not defined
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