Hello Oren,

We use a sort of informal approach to implementing new Galaxy API features 
(they're implemented when the need arises), so unfortunately it doesn't look 
like the features you are looking for exist yet. If you'd like to contribute 
them, the community would certainly appreciate it!

Greg Von Kuster

On Oct 28, 2011, at 12:45 PM, Oren Livne wrote:

> Dear Greg,
> 
> Thank you so much, this is exactly what I need. I will use the API access 
> (scripts/api/*.py) to create the new data library. I have two more questions:
> - Is there an API function for deleting a library?
> - Is there an API function to make a library accessible only to the user 
> whose API key is passed in?
> 
> Oren
> 
> On 10/27/2011 7:55 PM, Greg Von Kuster wrote:
>> Oren,
>> 
>> The best way to do this would be to use galaxy data libraries, uploading 
>> files from file system paths and not copying the files into the Galaxy file 
>> location.
>> 
>> The following provides all of the details about data libraries:
>> 
>> http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Libraries
>> 
>> 
>> The following provides specific details about the various options for 
>> uploading files to data libraries.
>> 
>> http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files
>> 
>> Let us know if you encounter any issues.
>> 
>> Greg Von Kuster
>> 
>> 
>> On Oct 27, 2011, at 4:31 PM, Oren Livne wrote:
>> 
>>> Dear All,
>>> 
>>> We have a large collection of large data files on our shared file system. 
>>> We would like to make a subset of them available to a galaxy user session 
>>> (based on user privileges; different subsets for different users). We want 
>>> to leave files in their original locations and point galaxy to their paths 
>>> without copying them.  What is the best option for implementing this 
>>> bridge? Remote data source/data library uploaded on the fly/other?
>>> 
>>> Thanks,
>>> Oren
>>> ___________________________________________________________
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>> Greg Von Kuster
>> Galaxy Development Team
>> g...@bx.psu.edu
>> 
>> 
>> 
> 

Greg Von Kuster
Galaxy Development Team
g...@bx.psu.edu




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