There seems to be a bug merging sam files when using splitting and BWA. The 
merge cats the files together and thus multiple headers are distributed through 
the file. Does anyone have plans to add a merge method to the SAM datatype 
class?

Thanks,

Ilya

Ilya Chorny Ph.D.
Bioinformatics Scientist I
Illumina, Inc.
9885 Towne Centre Drive
San Diego, CA 92121
Work: 858.202.4582
Email: icho...@illumina.com<mailto:icho...@illumina.com>
Website: www.illumina.com<http://www.illumina.com>


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