Hi Greg, I am in the process of trying to develop a set of Galaxy wrappers for the tools in my bedtools suite. I have read the Toolshed wiki, but I am still struggling with some very basic questions that I hope you can help me with.
1. How should a tarball repository be structured for the toolshed? For example, bedtools currently includes a Makefile plus a src/ directory and sub-directories for each tool. The compiled objects go to obj/ and the binaries to bin/. By reading the wiki I gather that I also need to add a new directory that contains an XML wrapper for each tool. Is that correct? Is there a specific name for said directory that is expected by the Toolshed? 2. Do you have an example repository that has a similar structure to what is described in #1? This would be very helpful as a means to follow the lead of something that already works. I apologize if answers to these questions are made abundantly clear somewhere yet I have somehow missed it. Best, Aaron ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
