On Wednesday, November 30, 2011, Peter van Heusden <p...@sanbi.ac.za> wrote:
> Hi there. When trying to convert some BLAST XML to tabular format, from
> an old version of BLAST (2.2.15), I had to make some changes to
> blastxml_to_tabular.py to get correct results. A patch is enclosed in
> this message (and attached). I don't think they should negatively affect
> anyone, but the semantics are as follows:

Do you have some test files to make into a unit test?

I think some of these problems "went away" with the
More recent versions of BLAST+, but it seems a good
Idea to try and cater to the older output if possible.

Peter
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