On Fri, Dec 9, 2011 at 4:49 PM, Liisa Koski <[email protected]> wrote: > Hi , > Looks like the tool Divide FASTQ file into paired and unpaired reads is not > recognizing my paired-end naming suffix > > @HWI-ST916:79:D04M5ACXX:1:1101:10000:100326 1:N:0:TGNCCA > @HWI-ST916:79:D04M5ACXX:1:1101:10000:100326 2:N:0:TGNCCA > > Is there a patch for this or another tool/way I can divide this fastq file? > > Thanks in advance, > Liisa
That's a new Illumina FASTQ file isn't it, where they went and changed the read naming? That annoyed quite a few people... Presumably you're talking about my tool of that name on the Galaxy Tool Shed? I can take a look at this now if you agree to test it ;) Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
