On Wed, Jan 4, 2012 at 12:04 PM, Langhorst, Brad <langho...@neb.com> wrote:

>   Usha:
>  Galaxy is essentially a wrapper around other command line tools.
> So, while you could probably extract some of its pieces to run on the
> command line, I don't know why you would want to.
I would argue it would be beneficial to invoke pipelines from the command
line instead of being forced to use the web-based interface.  command line
is beneficial for large #'s of datasets that need to be analyzed.

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