Hi all.
I am analysing paired end chip-seq samples. With single end reads I have seen people extend reads by an inferred insert size and then create coverage files in wig format.
I was wondering if there are any tools available for paired end data that will create a coverage file by looking at properly mapped paired ends in a bam file and extending coverage across the distance between them.
Thanks Shaun Webb -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
