Hi Galaxy Team, I am using custom genome build for creating a sam file. When I am trying to use the SAM to BAM tool inside Sam Tools with option locally cached I am getting an error like "Unspecified genome build, click the pencil icon in the history item to set the genome build". I added the custom genome .fa and .fai files path to sam_fa_indices.loc file. I could not find the locally cached genome in the drop down list when I clicked on the pencil icon. What should I do to specify the genome build on my sam file?
Regards, Deepthi. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
