Il giorno lun, 11/02/2013 alle 13.19 +0000, Peter Cock ha scritto: > On Fri, Feb 8, 2013 at 4:30 PM, Nicola Soranzo <sora...@crs4.it> wrote: > > Il giorno mer, 06/02/2013 alle 20.01 +0100, Nicola Soranzo ha scritto: > >> Hi Peter, > >> I added these file formats mostly as placeholders for a future > >> implementation. Now I have changed a bit the tool by removing acclist > >> and seqloc_xml formats since they are not recognized by the last > >> versions of dustmasker (I also sent an email to > >> blast-h...@ncbi.nlm.nih.gov to inform them of this bug). > >> As before, you can find the new version at: > >> > >> https://bitbucket.org/nsoranzo/ncbi_blast_plus > >> > >> I stripped the old commit and did a new one, not a very good practice, > >> sorry about that. > > It seems to have confused the bitbucket page a little, but I have > checked in your initial wrapper to my development repository (I > use the tools branch): > https://bitbucket.org/peterjc/galaxy-central/commits/2284d485e36f74f19b0dbe78709b098d9eba4ef6 > > Note I'm not going to include this in the Tool Shed release yet, > we need to sort out the file format definitions first.
Hi Peter, I implemented minimal datatypes for maskinfo ASN.1 binary and text, plus some other improvements to ncbi_blast_plus, and I sent you a pull request through Bitbucket for your development repository. I think that would be easier for you, let me know if it is not. Nicola ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/