I've installed Galaxy in local and following the Tool
I installed all necessary tools. However for some of then such as BWA,
Bowtie,... it's usually needed to create indexes.
Where should I store those indexes? In the galaxy directory or in each tool
directory? How can I tell galaxy where the indexes are?
I find a manual's page talking about it /
to organize the various index files for each build, but I don't know if
these folders should be stored into Galaxy directory (eg. in tool-data
directory) or what.
Could you please explain this a little?
Thank you and regards,
Rafa Hernández de Diego
Genomics of Gene Expression Lab.
Bioinformatics and Genomics Department
Centro de Investigación Príncipe Felipe (CIPF)
C/ Eduardo Primo Yúfera 3
46012 Valencia, Spain
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at: