Um... Lets see Jillian. Can the user who is running the Galaxy process
access the folders in question? Whats the chown/chmod on the folders?

--
Adam Brenner
Computer Science, Undergraduate Student
Donald Bren School of Information and Computer Sciences

Research Computing Support
Office of Information Technology
http://www.oit.uci.edu/rcs/

University of California, Irvine
www.ics.uci.edu/~aebrenne/
aebre...@uci.edu


On Mon, Apr 22, 2013 at 11:56 PM, Jillian Rowe
<jir2...@qatar-med.cornell.edu> wrote:
> Hi Adam,
>
> Nope, still getting the 'no files found'. Is there any troubleshooting tips 
> you could give me for file permissions?
>
> Best,
> Jillian
> ________________________________________
> From: Adam Brenner [aebre...@uci.edu]
> Sent: Sunday, April 21, 2013 9:42 PM
> To: Jillian Rowe
> Cc: galaxy-dev@lists.bx.psu.edu
> Subject: Re: [galaxy-dev] Problem using FTP upload
>
> Jillian,
>
> Make sure import/users is the full path. IE: /storage/import/users.
>
> If you are using the add-on provided by Jon in:
> http://dev.list.galaxyproject.org/user-names-with-authentication-td4659271.html
> make sure you add:
>
> ftp_upload_dir_identifier = username
>
> to universe_wsgi.ini. Save and restart.
>
>
> We have the same setup on our HPC cluster. Users copy their data to
> the large storage bricks via scp, rsync, etc...
>
> --
> Adam Brenner
> Computer Science, Undergraduate Student
> Donald Bren School of Information and Computer Sciences
>
> Research Computing Support
> Office of Information Technology
> http://www.oit.uci.edu/rcs/
>
> University of California, Irvine
> www.ics.uci.edu/~aebrenne/
> aebre...@uci.edu
>
>
> On Sun, Apr 21, 2013 at 12:00 AM, Jillian Rowe
> <jir2...@qatar-med.cornell.edu> wrote:
>> Hello,
>>
>> I would like to use the FTP upload option without actually having an FTP 
>> service setup. Instead users will scp to the directory.
>>
>> ftp_upload_dir = import/users
>> ftp_upload_site = notnothing
>>
>> if a create a import/users/username with username as my login I still get 
>> the message:
>>
>> Your FTP upload directory contains no files.
>> This Galaxy server allows you to upload files via FTP. To upload some files, 
>> log in to the FTP server at localhost using your Galaxy credentials (email 
>> address and password).
>>
>> According to this email tot he mailing list 
>> http://gmod.827538.n3.nabble.com/Configuring-Galaxy-for-FTP-upload-td3934194.html
>>  I thought I could do a setup such as I am trying now, but now I am not so 
>> sure.
>>
>> Any ideas?
>>
>> Best,
>> Jillian
>>
>>
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