my galaxy instance:
parent: 10587:1f34ec186fcf
Pack script.
branch: stable
commit: 3 modified, 91 unknown
update: (current)
testtoolshed.g2.bx.psu.edu:
parent: 10592:ea0c57f1cdf0 tip
Fix for unicode values in rst_to_html.
branch: default
commit: 34 unknown (clean)
update: (current)
Try to install this repository:
http://testtoolshed.g2.bx.psu.edu/view/rico/genome_diversity
URL: https://oocyte.bx.psu.edu/admin_toolshed/prepare_for_install?
tool_shed_url=http://testtoolshed.g2.bx.psu.edu/
&repository_ids=d43c67507430e220&changeset_revisions=b63d27fdf040
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/eggs/WebError-0.8a-
py2.7.egg/weberror/evalexception/middleware.py', line 364 in respond
app_iter = self.application(environ, detect_start_response)
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/eggs/Paste-1.7.5.1-
py2.7.egg/paste/recursive.py', line 84 in __call__
return self.application(environ, start_response)
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/galaxy/web/
framework/middleware/remoteuser.py', line 91 in __call__
return self.app( environ, start_response )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/eggs/Paste-1.7.5.1-
py2.7.egg/paste/httpexceptions.py', line 633 in __call__
return self.application(environ, start_response)
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/galaxy/web/
framework/base.py', line 132 in __call__
return self.handle_request( environ, start_response )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/galaxy/web/
framework/base.py', line 190 in handle_request
body = method( trans, **kwargs )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/galaxy/web/
framework/__init__.py', line 221 in decorator
return func( self, trans, *args, **kwargs )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/galaxy/webapps/
galaxy/controllers/admin_toolshed.py', line 911 in prepare_for_install
includes_tool_dependencies )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/tool_shed/util/
common_install_util.py', line 85 in get_dependencies_for_repository
installed_rd, missing_rd =
get_installed_and_missing_repository_dependencies_for_new_install
( trans, repo_info_tuple )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/tool_shed/util/
common_install_util.py', line 214 in
get_installed_and_missing_repository_dependencies_for_new_install
tool_shed, name, owner, changeset_revision,
prior_installation_required = suc.parse_repository_dependency_tuple
( rd_tup )
File '/scratch/galaxy/home/oocyte/galaxy_oocyte/lib/tool_shed/util/
shed_util_common.py', line 1197 in parse_repository_dependency_tuple
prior_installation_required = str( prior_installation_required )
UnboundLocalError: local variable 'prior_installation_required'
referenced before assignment
contains_error = False
repository_dependency_tuple = ['http://testtoolshed.g2.bx.psu.edu/',
'package_clapack_3_2_1', 'rico', '56a949e5f998', 'True', 'False']
-rico
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