It appears that the Tool Shed does not show the correct "readme" file
content.
1) get_readme_files() in lib/galaxy/webapps/tool_shed/controllers/
repository.py gets the correct metadata from the database
2) build_readme_files_dict() in lib/tool_shed/util/readme_util.py
reads data from whatever revision happens to be there (not the
requested revision)
As an example, compare the output from:
http://toolshed.g2.bx.psu.edu/repository/get_readme_files?
name=genome_diversity&owner=miller-lab&changeset_revision=5064f618ec1c
and:
http://toolshed.g2.bx.psu.edu/repos/miller-lab/genome_diversity/file/
5064f618ec1c/README
-rico
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