Hi Mohammed,

that seems to be a old Tool Shed bug that is already fixed. Which Galaxy
version are you running. Can you update to a more recent version?

Thanks for using Galaxy and deepTools,
Bjoern

> Hello,
> I recently discovered the DeepTools program and have been looking
> forward to using it with Galaxy Cloudman. Today I attempted to load
> DeepTools from the Galaxy tool shed on my freshly started Galaxy
> Cloudman 2.0 instance and got the following error:
> 
> Internal Server Error
> Galaxy was unable to sucessfully complete your request
> URL: 
> http://ec2-54-226-209-68.compute-1.amazonaws.com/admin_toolshed/prepare_for_install?tool_shed_url=http://toolshed.g2.bx.psu.edu/&repository_ids=8aa7aee9b90e1791&changeset_revisions=1ee0b1ecf500
> Module galaxy.web.framework.middleware.error:149 in __call__
> >>  app_iter = self.application(environ, sr_checker)
> Module paste.recursive:84 in __call__
> >>  return self.application(environ, start_response)
> Module paste.httpexceptions:633 in __call__
> >>  return self.application(environ, start_response)
> Module galaxy.web.framework.base:132 in __call__
> >>  return self.handle_request( environ, start_response )
> Module galaxy.web.framework.base:190 in handle_request
> >>  body = method( trans, **kwargs )
> Module galaxy.web.framework:221 in decorator
> >>  return func( self, trans, *args, **kwargs )
> Module galaxy.webapps.galaxy.controllers.admin_toolshed:896 in 
> prepare_for_install
> >>  common_install_util.get_dependencies_for_repository( trans, 
> >> tool_shed_url, repo_info_dict,includes_tool_dependencies )
> Module tool_shed.util.common_install_util:84 in 
> get_dependencies_for_repository
> >>  installed_rd, missing_rd = 
> >> get_installed_and_missing_repository_dependencies_for_new_install(trans, 
> >> repo_info_tuple )
> Module tool_shed.util.common_install_util:190 
> inget_installed_and_missing_repository_dependencies_for_new_install
> >>  tool_shed, name, owner, changeset_revision, prior_installation_required 
> >> =suc.parse_repository_dependency_tuple( rd_tup )
> Module tool_shed.util.shed_util_common:1106 in 
> parse_repository_dependency_tuple
> >>  prior_installation_required = str( prior_installation_required )
> UnboundLocalError: local variable 'prior_installation_required'
> referenced before assignment
> 
> 
> I got this error when I tried to install either of the three revisions
> of the tool. Am I doing something wrong?
> 
> 
> 
> 
> Any guidance is appreciated! Thanks in advance!
> 
> 
> Cheers, 
> Mo Heydarian
> 
> PhD candidate 
> The Johns Hopkins School of Medicine
> Department of Biological Chemistry 
> 725 Wolfe Street
> 402 Biophysics
> Baltimore, MD 21205



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