Here's what I'm seeing: ubuntu@ip-10-182-195-79:/$ ls / bin boot dev etc export home initrd.img lib lib64 lost+found media mnt opt proc root run sbin selinux srv sys tmp usr var vmlinuz ubuntu@ip-10-182-195-79:/$ ls mnt cm galaxyData lost+found transient_nfs ubuntu@ip-10-182-195-79:/$ ls /mnt/galaxyData/ export files tmp upload_store
On Fri, Dec 20, 2013 at 2:20 PM, Dannon Baker <[email protected]> wrote: > Does /mnt/galaxy exist, and does it have all of the expected galaxy > components? /mnt/galaxyData might exist, but it should be either empty or a > symlink to /mnt/galaxy if I remember correctly. > > If you're launching your cluster from usegalaxy.org/cloudlaunch, you should > always be using the latest stuff. > > > On Fri, Dec 20, 2013 at 2:13 PM, greg <[email protected]> wrote: >> >> Thanks. I was wrong before. I actually do see a /mnt/galaxyData. >> >> Should I not being seeing that? Am I not on cloudman 2.0? >> >> -Greg >> >> On Fri, Dec 20, 2013 at 1:57 PM, Dannon Baker <[email protected]> >> wrote: >> > With the Cloudman 2.0 release, the galaxyData and galaxyTools volumes >> > have >> > been merged to a single 'galaxy' volume. /mnt/galaxy is now your single >> > persistent (by default, at least) volume, so, if you install your tool >> > to >> > here and share everything should work as expected. >> > >> > -Dannon >> > >> > >> > On Fri, Dec 20, 2013 at 1:53 PM, greg <[email protected]> wrote: >> >> >> >> Hi guys, >> >> >> >> I just launched an instance from https://usegalaxy.org/cloudlaunch and >> >> chose "data cluster" when prompted. >> >> >> >> Everything seems to have gone ok, but when I ssh in, I don't see >> >> /mnt/galaxyData >> >> >> >> >> >> Background: >> >> >> >> Basically we have a bioinformatics tool that needs SGE to run. So I >> >> want to install it on a galaxy cloud instance and then provide the >> >> share string to other researchers. >> >> >> >> I did this successfully a year or two ago by installing it to >> >> /mnt/galaxyData. >> >> >> >> Thanks, >> >> >> >> Greg >> >> ___________________________________________________________ >> >> Please keep all replies on the list by using "reply all" >> >> in your mail client. To manage your subscriptions to this >> >> and other Galaxy lists, please use the interface at: >> >> http://lists.bx.psu.edu/ >> >> >> >> To search Galaxy mailing lists use the unified search at: >> >> http://galaxyproject.org/search/mailinglists/ >> > >> > > > ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
