On Tue, Feb 18, 2014 at 12:00 PM, Peter Cock <p.j.a.c...@googlemail.com>wrote:

> Hi all,
>
> I just updated my development server, and ran into what looks
> like a missing dependency:
>
> $ ./run.sh
> ...
> galaxy.jobs.manager DEBUG 2014-02-18 11:58:06,422 Starting job handler
> galaxy.jobs INFO 2014-02-18 11:58:06,422 Handler 'main' will load all
> configured runner plugins
> galaxy.jobs.runners DEBUG 2014-02-18 11:58:06,423 Starting 5 LocalRunner
> workers
> galaxy.jobs DEBUG 2014-02-18 11:58:06,425 Loaded job runner
> 'galaxy.jobs.runners.local:LocalJobRunner' as 'local'
> galaxy.jobs.runners DEBUG 2014-02-18 11:58:06,460 Starting 3 LWRRunner
> workers
> Traceback (most recent call last):
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/webapps/galaxy/buildapp.py",
> line 39, in app_factory
>     app = UniverseApplication( global_conf = global_conf, **kwargs )
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/app.py", line 130, in
> __init__
>     self.job_manager = manager.JobManager( self )
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/manager.py", line 31,
> in __init__
>     self.job_handler = handler.JobHandler( app )
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/handler.py", line 31,
> in __init__
>     self.dispatcher = DefaultJobDispatcher( app )
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/handler.py", line 576,
> in __init__
>     self.job_runners = self.app.job_config.get_job_runner_plugins(
> self.app.config.server_name )
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/__init__.py", line 496,
> in get_job_runner_plugins
>     rval[id] = runner_class( self.app, runner[ 'workers' ], **runner.get(
> 'kwds', {} ) )
>   File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr.py", line
> 45, in __init__
>     self.client_manager = build_client_manager(**client_manager_kwargs)
>   File
> "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr_client/manager.py",
> line 41, in build_client_manager
>     return MessageQueueClientManager(**kwargs)
>   File
> "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr_client/manager.py",
> line 89, in __init__
>     self.exchange = LwrExchange(self.url, self.manager_name)
>   File
> "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr_client/amqp_exchange.py",
> line 37, in __init__
>     raise Exception(KOMBU_UNAVAILABLE)
> Exception: Attempting to bind to AMQP message queue, but kombu dependency
> unavailable
>
>
> $ hg summary
> parent: 13557:75b13d642f94 tip
>  Allow LWR runner to publish/consume messages via message queue.
> branch: default
> commit: 9 modified, 240 unknown
> update: (current)
>
> (Local modifications mostly extra logging lines; nothing which
> looked relevant here)
>
> Regards,
>
> Peter
>


Also (not unexpectedly) breaking my TravisCI tool tests, e.g.
https://travis-ci.org/peterjc/pico_galaxy/builds/19101036

Peter
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