That should be fixed now, sorry about that.
-John
On Tue, Feb 18, 2014 at 6:07 AM, Peter Cock <p.j.a.c...@googlemail.com> wrote:
> On Tue, Feb 18, 2014 at 12:00 PM, Peter Cock <p.j.a.c...@googlemail.com>
> wrote:
>>
>> Hi all,
>>
>> I just updated my development server, and ran into what looks
>> like a missing dependency:
>>
>> $ ./run.sh
>> ...
>> galaxy.jobs.manager DEBUG 2014-02-18 11:58:06,422 Starting job handler
>> galaxy.jobs INFO 2014-02-18 11:58:06,422 Handler 'main' will load all
>> configured runner plugins
>> galaxy.jobs.runners DEBUG 2014-02-18 11:58:06,423 Starting 5 LocalRunner
>> workers
>> galaxy.jobs DEBUG 2014-02-18 11:58:06,425 Loaded job runner
>> 'galaxy.jobs.runners.local:LocalJobRunner' as 'local'
>> galaxy.jobs.runners DEBUG 2014-02-18 11:58:06,460 Starting 3 LWRRunner
>> workers
>> Traceback (most recent call last):
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/webapps/galaxy/buildapp.py",
>> line 39, in app_factory
>> app = UniverseApplication( global_conf = global_conf, **kwargs )
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/app.py", line 130, in
>> __init__
>> self.job_manager = manager.JobManager( self )
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/manager.py", line 31,
>> in __init__
>> self.job_handler = handler.JobHandler( app )
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/handler.py", line 31,
>> in __init__
>> self.dispatcher = DefaultJobDispatcher( app )
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/handler.py", line 576,
>> in __init__
>> self.job_runners = self.app.job_config.get_job_runner_plugins(
>> self.app.config.server_name )
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/__init__.py", line 496,
>> in get_job_runner_plugins
>> rval[id] = runner_class( self.app, runner[ 'workers' ], **runner.get(
>> 'kwds', {} ) )
>> File "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr.py", line
>> 45, in __init__
>> self.client_manager = build_client_manager(**client_manager_kwargs)
>> File
>> "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr_client/manager.py",
>> line 41, in build_client_manager
>> return MessageQueueClientManager(**kwargs)
>> File
>> "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr_client/manager.py",
>> line 89, in __init__
>> self.exchange = LwrExchange(self.url, self.manager_name)
>> File
>> "/mnt/galaxy/galaxy-central/lib/galaxy/jobs/runners/lwr_client/amqp_exchange.py",
>> line 37, in __init__
>> raise Exception(KOMBU_UNAVAILABLE)
>> Exception: Attempting to bind to AMQP message queue, but kombu dependency
>> unavailable
>>
>>
>> $ hg summary
>> parent: 13557:75b13d642f94 tip
>> Allow LWR runner to publish/consume messages via message queue.
>> branch: default
>> commit: 9 modified, 240 unknown
>> update: (current)
>>
>> (Local modifications mostly extra logging lines; nothing which
>> looked relevant here)
>>
>> Regards,
>>
>> Peter
>
>
>
> Also (not unexpectedly) breaking my TravisCI tool tests, e.g.
> https://travis-ci.org/peterjc/pico_galaxy/builds/19101036
>
> Peter
>
>
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