Hi Milad,

That's just a warning, it should not cause any issues (I've just confirmed
this locally on a sqlite instance).  So you're sure you have histories with
deleted datasets older than 0 days?  The commands you have run will not
remove datasets that haven't been deleted first by a user (usually through
the history panel).

-Dannon


On Wed, Apr 23, 2014 at 9:21 AM, Milad Bastami <mi.bast...@live.com> wrote:

> Dear all,
> I have some unwanted datasets to remove but I need their main histories,
> so in galaxy I just deleted the unwanted datasets but not the histories.
> Then I tried to purge the deleted datasets with the following commands:
>
> *python scripts/cleanup_datasets/cleanup_datasets.py universe_wsgi.ini -d
> 0 -6 -r  *
> *python scripts/cleanup_datasets/cleanup_datasets.py universe_wsgi.ini -d
> 0 -3 -r *
>
> and I saw the this error:
>
> */galaxy-dist/eggs/SQLAlchemy-0.7.9-py2.7-linux-x86_64-ucs4.egg/sqlalchemy/types.py:215:
> SAWarning: Dialect sqlite+pysqlite does *not* support Decimal objects
> natively, and SQLAlchemy must convert from floating point - rounding errors
> and other issues may occur. Please consider storing Decimal numbers as
> strings or integers on this platform for lossless storage.*
> *Purged 0 datasetsFreed disk space:  0Elapsed time:  0.0748069286346*
>
> Unfortunately I can't understand the warning and why nothing was deleted.
> Any help would be most appreciated.
>
>
> ___________________________________________________________
> Please keep all replies on the list by using "reply all"
> in your mail client.  To manage your subscriptions to this
> and other Galaxy lists, please use the interface at:
>   http://lists.bx.psu.edu/
>
> To search Galaxy mailing lists use the unified search at:
>   http://galaxyproject.org/search/mailinglists/
>
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

Reply via email to